Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav6n-6A0A075B6B2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6n-6A0A075B6B2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm26039-201ENSMUST00000158152 144 ntBASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6n-6A0A075B6B2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav6n-6A0A075B6B2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms