Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm12382-201ENSMUST00000122005 922 ntBASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm4968-201ENSMUST00000071458 858 ntBASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav12d-3A0A075B6A4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm13186-201ENSMUST00000118031 316 ntBASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm2011-201ENSMUST00000203124 1263 ntBASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm10033-202ENSMUST00000211874 928 ntBASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav12d-3A0A075B6A4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav12d-3A0A075B6A4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms