Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm18101-201ENSMUST00000215769 548 ntBASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.11□□□□□ -0.47
Trav4-4-dv10A0A075B651 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm22697-201ENSMUST00000175194 63 ntBASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav4-4-dv10A0A075B651 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav4-4-dv10A0A075B651 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms