Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm27011-201ENSMUST00000182352 972 ntBASIC12.73□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.73□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm13559-201ENSMUST00000120476 863 ntBASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-2-dv6-2A0A075B650 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.71□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Gm22240-201ENSMUST00000175225 82 ntBASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Gm37055-201ENSMUST00000191866 133 ntBASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-2-dv6-2A0A075B650 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms