Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Gm42473-201ENSMUST00000201056 2291 ntBASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC10.95□□□□□ -0.66
Trav7-6A0A075B640 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav7-6A0A075B640 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Gm43799-201ENSMUST00000201845 579 ntBASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav7-6A0A075B640 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trav7-6A0A075B640 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms