Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm8000-201ENSMUST00000188378 592 ntBASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm9727-201ENSMUST00000161387 555 ntBASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav5-1A0A075B5Z7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav5-1A0A075B5Z7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms