Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RpgrQ9R0X5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RpgrQ9R0X5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RpgrQ9R0X5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RpgrQ9R0X5 Gm11599-201ENSMUST00000118720 878 ntBASIC22.81■■□□□ 1.24
RpgrQ9R0X5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.81■■□□□ 1.24
RpgrQ9R0X5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RpgrQ9R0X5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
RpgrQ9R0X5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RpgrQ9R0X5 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.79■■□□□ 1.24
RpgrQ9R0X5 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.79■■□□□ 1.24
RpgrQ9R0X5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.79■■□□□ 1.24
RpgrQ9R0X5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
RpgrQ9R0X5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.79■■□□□ 1.24
RpgrQ9R0X5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.78■■□□□ 1.24
RpgrQ9R0X5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
RpgrQ9R0X5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.78■■□□□ 1.24
RpgrQ9R0X5 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.78■■□□□ 1.24
RpgrQ9R0X5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
RpgrQ9R0X5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RpgrQ9R0X5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
RpgrQ9R0X5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
RpgrQ9R0X5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
RpgrQ9R0X5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
RpgrQ9R0X5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
RpgrQ9R0X5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
RpgrQ9R0X5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
RpgrQ9R0X5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
RpgrQ9R0X5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
RpgrQ9R0X5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RpgrQ9R0X5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.74■■□□□ 1.23
RpgrQ9R0X5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RpgrQ9R0X5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.73■■□□□ 1.23
RpgrQ9R0X5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RpgrQ9R0X5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
RpgrQ9R0X5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RpgrQ9R0X5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
RpgrQ9R0X5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
RpgrQ9R0X5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RpgrQ9R0X5 Gm37136-201ENSMUST00000194368 194 ntBASIC22.72■■□□□ 1.23
RpgrQ9R0X5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
RpgrQ9R0X5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
RpgrQ9R0X5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RpgrQ9R0X5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.72■■□□□ 1.23
RpgrQ9R0X5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
RpgrQ9R0X5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
RpgrQ9R0X5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RpgrQ9R0X5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RpgrQ9R0X5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
RpgrQ9R0X5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RpgrQ9R0X5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RpgrQ9R0X5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RpgrQ9R0X5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RpgrQ9R0X5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
RpgrQ9R0X5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.69■■□□□ 1.22
RpgrQ9R0X5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RpgrQ9R0X5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RpgrQ9R0X5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RpgrQ9R0X5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
RpgrQ9R0X5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RpgrQ9R0X5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RpgrQ9R0X5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RpgrQ9R0X5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.67■■□□□ 1.22
RpgrQ9R0X5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RpgrQ9R0X5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.67■■□□□ 1.22
RpgrQ9R0X5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RpgrQ9R0X5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RpgrQ9R0X5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RpgrQ9R0X5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RpgrQ9R0X5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RpgrQ9R0X5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RpgrQ9R0X5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.65■■□□□ 1.22
RpgrQ9R0X5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RpgrQ9R0X5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.64■■□□□ 1.22
RpgrQ9R0X5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RpgrQ9R0X5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RpgrQ9R0X5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RpgrQ9R0X5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RpgrQ9R0X5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RpgrQ9R0X5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RpgrQ9R0X5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RpgrQ9R0X5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.62■■□□□ 1.21
RpgrQ9R0X5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RpgrQ9R0X5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RpgrQ9R0X5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RpgrQ9R0X5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
RpgrQ9R0X5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RpgrQ9R0X5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RpgrQ9R0X5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.61■■□□□ 1.21
RpgrQ9R0X5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RpgrQ9R0X5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RpgrQ9R0X5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
RpgrQ9R0X5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RpgrQ9R0X5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.6■■□□□ 1.21
RpgrQ9R0X5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RpgrQ9R0X5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.59■■□□□ 1.21
RpgrQ9R0X5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
RpgrQ9R0X5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RpgrQ9R0X5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RpgrQ9R0X5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 376 ms