Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19,81■□□□□ 0,76
Nubp1Q9R060 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19,8■□□□□ 0,76
Nubp1Q9R060 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19,8■□□□□ 0,76
Nubp1Q9R060 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19,8■□□□□ 0,76
Nubp1Q9R060 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19,8■□□□□ 0,76
Nubp1Q9R060 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19,79■□□□□ 0,76
Nubp1Q9R060 Gm15820-201ENSMUST00000201566 728 ntBASIC19,79■□□□□ 0,76
Nubp1Q9R060 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19,79■□□□□ 0,76
Nubp1Q9R060 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19,79■□□□□ 0,76
Nubp1Q9R060 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19,78■□□□□ 0,76
Nubp1Q9R060 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19,78■□□□□ 0,76
Nubp1Q9R060 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19,78■□□□□ 0,76
Nubp1Q9R060 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19,77■□□□□ 0,76
Nubp1Q9R060 Gm42501-201ENSMUST00000200220 1026 ntBASIC19,77■□□□□ 0,76
Nubp1Q9R060 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19,77■□□□□ 0,76
Nubp1Q9R060 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19,76■□□□□ 0,75
Nubp1Q9R060 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19,76■□□□□ 0,75
Nubp1Q9R060 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19,76■□□□□ 0,75
Nubp1Q9R060 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19,76■□□□□ 0,75
Nubp1Q9R060 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19,76■□□□□ 0,75
Nubp1Q9R060 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19,76■□□□□ 0,75
Nubp1Q9R060 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19,76■□□□□ 0,75
Nubp1Q9R060 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19,75■□□□□ 0,75
Nubp1Q9R060 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19,75■□□□□ 0,75
Nubp1Q9R060 Gm44428-201ENSMUST00000204474 874 ntBASIC19,75■□□□□ 0,75
Nubp1Q9R060 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19,75■□□□□ 0,75
Nubp1Q9R060 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19,75■□□□□ 0,75
Nubp1Q9R060 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19,74■□□□□ 0,75
Nubp1Q9R060 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19,74■□□□□ 0,75
Nubp1Q9R060 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19,74■□□□□ 0,75
Nubp1Q9R060 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19,74■□□□□ 0,75
Nubp1Q9R060 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19,74■□□□□ 0,75
Nubp1Q9R060 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19,73■□□□□ 0,75
Nubp1Q9R060 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19,73■□□□□ 0,75
Nubp1Q9R060 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19,73■□□□□ 0,75
Nubp1Q9R060 Gm45444-201ENSMUST00000211394 898 ntBASIC19,73■□□□□ 0,75
Nubp1Q9R060 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19,73■□□□□ 0,75
Nubp1Q9R060 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19,73■□□□□ 0,75
Nubp1Q9R060 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19,73■□□□□ 0,75
Nubp1Q9R060 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19,72■□□□□ 0,75
Nubp1Q9R060 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19,72■□□□□ 0,75
Nubp1Q9R060 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19,72■□□□□ 0,75
Nubp1Q9R060 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19,72■□□□□ 0,75
Nubp1Q9R060 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19,72■□□□□ 0,75
Nubp1Q9R060 Nsd1-203ENSMUST00000224156 1149 ntBASIC19,72■□□□□ 0,75
Nubp1Q9R060 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19,71■□□□□ 0,75
Nubp1Q9R060 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19,71■□□□□ 0,75
Nubp1Q9R060 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19,7■□□□□ 0,74
Nubp1Q9R060 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19,7■□□□□ 0,74
Nubp1Q9R060 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19,7■□□□□ 0,74
Nubp1Q9R060 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19,7■□□□□ 0,74
Nubp1Q9R060 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19,7■□□□□ 0,74
Nubp1Q9R060 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19,7■□□□□ 0,74
Nubp1Q9R060 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19,69■□□□□ 0,74
Nubp1Q9R060 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19,69■□□□□ 0,74
Nubp1Q9R060 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19,68■□□□□ 0,74
Nubp1Q9R060 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19,68■□□□□ 0,74
Nubp1Q9R060 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19,68■□□□□ 0,74
Nubp1Q9R060 Gm43592-201ENSMUST00000196922 1165 ntBASIC19,68■□□□□ 0,74
Nubp1Q9R060 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19,68■□□□□ 0,74
Nubp1Q9R060 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19,68■□□□□ 0,74
Nubp1Q9R060 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19,68■□□□□ 0,74
Nubp1Q9R060 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19,67■□□□□ 0,74
Nubp1Q9R060 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19,67■□□□□ 0,74
Nubp1Q9R060 Gm14117-201ENSMUST00000122417 843 ntBASIC19,67■□□□□ 0,74
Nubp1Q9R060 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19,67■□□□□ 0,74
Nubp1Q9R060 Gm18755-201ENSMUST00000218030 1099 ntBASIC19,67■□□□□ 0,74
Nubp1Q9R060 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19,67■□□□□ 0,74
Nubp1Q9R060 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19,67■□□□□ 0,74
Nubp1Q9R060 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19,66■□□□□ 0,74
Nubp1Q9R060 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19,66■□□□□ 0,74
Nubp1Q9R060 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19,66■□□□□ 0,74
Nubp1Q9R060 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19,66■□□□□ 0,74
Nubp1Q9R060 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19,66■□□□□ 0,74
Nubp1Q9R060 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19,65■□□□□ 0,74
Nubp1Q9R060 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19,65■□□□□ 0,74
Nubp1Q9R060 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19,65■□□□□ 0,74
Nubp1Q9R060 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19,65■□□□□ 0,74
Nubp1Q9R060 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19,65■□□□□ 0,74
Nubp1Q9R060 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19,65■□□□□ 0,74
Nubp1Q9R060 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19,65■□□□□ 0,74
Nubp1Q9R060 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19,64■□□□□ 0,73
Nubp1Q9R060 Gm44487-201ENSMUST00000205145 325 ntBASIC19,64■□□□□ 0,73
Nubp1Q9R060 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19,64■□□□□ 0,73
Nubp1Q9R060 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19,64■□□□□ 0,73
Nubp1Q9R060 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19,63■□□□□ 0,73
Nubp1Q9R060 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19,63■□□□□ 0,73
Nubp1Q9R060 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19,63■□□□□ 0,73
Nubp1Q9R060 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19,63■□□□□ 0,73
Nubp1Q9R060 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19,63■□□□□ 0,73
Nubp1Q9R060 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19,63■□□□□ 0,73
Nubp1Q9R060 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19,63■□□□□ 0,73
Nubp1Q9R060 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19,63■□□□□ 0,73
Nubp1Q9R060 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19,62■□□□□ 0,73
Nubp1Q9R060 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19,62■□□□□ 0,73
Nubp1Q9R060 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19,62■□□□□ 0,73
Nubp1Q9R060 Gm13238-201ENSMUST00000117655 780 ntBASIC19,62■□□□□ 0,73
Nubp1Q9R060 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19,62■□□□□ 0,73
Nubp1Q9R060 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19,62■□□□□ 0,73
Nubp1Q9R060 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19,62■□□□□ 0,73
Retrieved 100 of 76,532 protein–RNA pairs in 25,5 ms