Protein–RNA interactions for Protein: Q9DCK3

Tspan4, Tetraspanin-4, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan4Q9DCK3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tspan4Q9DCK3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Tspan4Q9DCK3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tspan4Q9DCK3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tspan4Q9DCK3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tspan4Q9DCK3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tspan4Q9DCK3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tspan4Q9DCK3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tspan4Q9DCK3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tspan4Q9DCK3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tspan4Q9DCK3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tspan4Q9DCK3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Tspan4Q9DCK3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tspan4Q9DCK3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tspan4Q9DCK3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tspan4Q9DCK3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tspan4Q9DCK3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tspan4Q9DCK3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tspan4Q9DCK3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tspan4Q9DCK3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Tspan4Q9DCK3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tspan4Q9DCK3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tspan4Q9DCK3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.89■□□□□ 0.61
Tspan4Q9DCK3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Tspan4Q9DCK3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.88■□□□□ 0.61
Tspan4Q9DCK3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tspan4Q9DCK3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.88■□□□□ 0.61
Tspan4Q9DCK3 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.88■□□□□ 0.61
Tspan4Q9DCK3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Tspan4Q9DCK3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tspan4Q9DCK3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tspan4Q9DCK3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Tspan4Q9DCK3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tspan4Q9DCK3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.87■□□□□ 0.61
Tspan4Q9DCK3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tspan4Q9DCK3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tspan4Q9DCK3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tspan4Q9DCK3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tspan4Q9DCK3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tspan4Q9DCK3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.86■□□□□ 0.61
Tspan4Q9DCK3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tspan4Q9DCK3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tspan4Q9DCK3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tspan4Q9DCK3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tspan4Q9DCK3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tspan4Q9DCK3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tspan4Q9DCK3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tspan4Q9DCK3 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.85■□□□□ 0.61
Tspan4Q9DCK3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Tspan4Q9DCK3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tspan4Q9DCK3 Gm24970-201ENSMUST00000175582 82 ntBASIC18.84■□□□□ 0.61
Tspan4Q9DCK3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.84■□□□□ 0.61
Tspan4Q9DCK3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.84■□□□□ 0.61
Tspan4Q9DCK3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tspan4Q9DCK3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Tspan4Q9DCK3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Tspan4Q9DCK3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tspan4Q9DCK3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tspan4Q9DCK3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tspan4Q9DCK3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tspan4Q9DCK3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tspan4Q9DCK3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tspan4Q9DCK3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tspan4Q9DCK3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tspan4Q9DCK3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tspan4Q9DCK3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tspan4Q9DCK3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Tspan4Q9DCK3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tspan4Q9DCK3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Tspan4Q9DCK3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tspan4Q9DCK3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tspan4Q9DCK3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tspan4Q9DCK3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tspan4Q9DCK3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.81■□□□□ 0.6
Tspan4Q9DCK3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tspan4Q9DCK3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tspan4Q9DCK3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tspan4Q9DCK3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tspan4Q9DCK3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tspan4Q9DCK3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tspan4Q9DCK3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tspan4Q9DCK3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tspan4Q9DCK3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tspan4Q9DCK3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.8■□□□□ 0.6
Tspan4Q9DCK3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tspan4Q9DCK3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.8■□□□□ 0.6
Tspan4Q9DCK3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tspan4Q9DCK3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tspan4Q9DCK3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tspan4Q9DCK3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tspan4Q9DCK3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tspan4Q9DCK3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tspan4Q9DCK3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tspan4Q9DCK3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tspan4Q9DCK3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tspan4Q9DCK3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Tspan4Q9DCK3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Tspan4Q9DCK3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tspan4Q9DCK3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tspan4Q9DCK3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms