Protein–RNA interactions for Protein: Q9D8D0

Tnfrsf13c, Tumor necrosis factor receptor superfamily member 13C, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13cQ9D8D0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Tnfrsf13cQ9D8D0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf13cQ9D8D0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf13cQ9D8D0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf13cQ9D8D0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Tnfrsf13cQ9D8D0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf13cQ9D8D0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tnfrsf13cQ9D8D0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Tnfrsf13cQ9D8D0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf13cQ9D8D0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf13cQ9D8D0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf13cQ9D8D0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf13cQ9D8D0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf13cQ9D8D0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf13cQ9D8D0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf13cQ9D8D0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf13cQ9D8D0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf13cQ9D8D0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.61■□□□□ 0.41
Tnfrsf13cQ9D8D0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.61■□□□□ 0.41
Tnfrsf13cQ9D8D0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf13cQ9D8D0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf13cQ9D8D0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf13cQ9D8D0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf13cQ9D8D0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf13cQ9D8D0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Tnfrsf13cQ9D8D0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf13cQ9D8D0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.59■□□□□ 0.41
Tnfrsf13cQ9D8D0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Tnfrsf13cQ9D8D0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf13cQ9D8D0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf13cQ9D8D0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf13cQ9D8D0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Tnfrsf13cQ9D8D0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf13cQ9D8D0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf13cQ9D8D0 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.58■□□□□ 0.41
Tnfrsf13cQ9D8D0 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.58■□□□□ 0.41
Tnfrsf13cQ9D8D0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf13cQ9D8D0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.58■□□□□ 0.4
Tnfrsf13cQ9D8D0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf13cQ9D8D0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf13cQ9D8D0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tnfrsf13cQ9D8D0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.57■□□□□ 0.4
Tnfrsf13cQ9D8D0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.57■□□□□ 0.4
Tnfrsf13cQ9D8D0 Particl-201ENSMUST00000205370 1560 ntBASIC17.57■□□□□ 0.4
Tnfrsf13cQ9D8D0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf13cQ9D8D0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf13cQ9D8D0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf13cQ9D8D0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf13cQ9D8D0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf13cQ9D8D0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf13cQ9D8D0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf13cQ9D8D0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf13cQ9D8D0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf13cQ9D8D0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.55■□□□□ 0.4
Tnfrsf13cQ9D8D0 Zfp131-205ENSMUST00000223812 663 ntBASIC17.55■□□□□ 0.4
Tnfrsf13cQ9D8D0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf13cQ9D8D0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tnfrsf13cQ9D8D0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf13cQ9D8D0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf13cQ9D8D0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Tnfrsf13cQ9D8D0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf13cQ9D8D0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf13cQ9D8D0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf13cQ9D8D0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Tnfrsf13cQ9D8D0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.53■□□□□ 0.4
Tnfrsf13cQ9D8D0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf13cQ9D8D0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf13cQ9D8D0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf13cQ9D8D0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf13cQ9D8D0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Tnfrsf13cQ9D8D0 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.52■□□□□ 0.4
Tnfrsf13cQ9D8D0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Tnfrsf13cQ9D8D0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf13cQ9D8D0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf13cQ9D8D0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.51■□□□□ 0.39
Tnfrsf13cQ9D8D0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf13cQ9D8D0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf13cQ9D8D0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf13cQ9D8D0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Tnfrsf13cQ9D8D0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf13cQ9D8D0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf13cQ9D8D0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf13cQ9D8D0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf13cQ9D8D0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf13cQ9D8D0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf13cQ9D8D0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.49■□□□□ 0.39
Tnfrsf13cQ9D8D0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf13cQ9D8D0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf13cQ9D8D0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf13cQ9D8D0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.49■□□□□ 0.39
Tnfrsf13cQ9D8D0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf13cQ9D8D0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf13cQ9D8D0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf13cQ9D8D0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf13cQ9D8D0 Gm24970-201ENSMUST00000175582 82 ntBASIC17.48■□□□□ 0.39
Tnfrsf13cQ9D8D0 Gm30023-201ENSMUST00000197970 889 ntBASIC17.48■□□□□ 0.39
Tnfrsf13cQ9D8D0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf13cQ9D8D0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf13cQ9D8D0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf13cQ9D8D0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms