Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcfc1r1Q9CYQ5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcfc1r1Q9CYQ5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcfc1r1Q9CYQ5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcfc1r1Q9CYQ5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcfc1r1Q9CYQ5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcfc1r1Q9CYQ5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcfc1r1Q9CYQ5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcfc1r1Q9CYQ5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Hcfc1r1Q9CYQ5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hcfc1r1Q9CYQ5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hcfc1r1Q9CYQ5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hcfc1r1Q9CYQ5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hcfc1r1Q9CYQ5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hcfc1r1Q9CYQ5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hcfc1r1Q9CYQ5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hcfc1r1Q9CYQ5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcfc1r1Q9CYQ5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.72■□□□□ 0.75
Hcfc1r1Q9CYQ5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Hcfc1r1Q9CYQ5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hcfc1r1Q9CYQ5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hcfc1r1Q9CYQ5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hcfc1r1Q9CYQ5 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.71■□□□□ 0.75
Hcfc1r1Q9CYQ5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hcfc1r1Q9CYQ5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hcfc1r1Q9CYQ5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hcfc1r1Q9CYQ5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hcfc1r1Q9CYQ5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hcfc1r1Q9CYQ5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hcfc1r1Q9CYQ5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hcfc1r1Q9CYQ5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hcfc1r1Q9CYQ5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hcfc1r1Q9CYQ5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hcfc1r1Q9CYQ5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hcfc1r1Q9CYQ5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcfc1r1Q9CYQ5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hcfc1r1Q9CYQ5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hcfc1r1Q9CYQ5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hcfc1r1Q9CYQ5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hcfc1r1Q9CYQ5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.68■□□□□ 0.74
Hcfc1r1Q9CYQ5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.68■□□□□ 0.74
Hcfc1r1Q9CYQ5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hcfc1r1Q9CYQ5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcfc1r1Q9CYQ5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcfc1r1Q9CYQ5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcfc1r1Q9CYQ5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcfc1r1Q9CYQ5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcfc1r1Q9CYQ5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcfc1r1Q9CYQ5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hcfc1r1Q9CYQ5 Zfp131-205ENSMUST00000223812 663 ntBASIC19.67■□□□□ 0.74
Hcfc1r1Q9CYQ5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hcfc1r1Q9CYQ5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hcfc1r1Q9CYQ5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcfc1r1Q9CYQ5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcfc1r1Q9CYQ5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcfc1r1Q9CYQ5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.64■□□□□ 0.73
Hcfc1r1Q9CYQ5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hcfc1r1Q9CYQ5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hcfc1r1Q9CYQ5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcfc1r1Q9CYQ5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hcfc1r1Q9CYQ5 Gm24970-201ENSMUST00000175582 82 ntBASIC19.63■□□□□ 0.73
Hcfc1r1Q9CYQ5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hcfc1r1Q9CYQ5 Gm9397-201ENSMUST00000200125 605 ntBASIC19.63■□□□□ 0.73
Hcfc1r1Q9CYQ5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcfc1r1Q9CYQ5 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.63■□□□□ 0.73
Hcfc1r1Q9CYQ5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcfc1r1Q9CYQ5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.62■□□□□ 0.73
Hcfc1r1Q9CYQ5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.62■□□□□ 0.73
Hcfc1r1Q9CYQ5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcfc1r1Q9CYQ5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hcfc1r1Q9CYQ5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hcfc1r1Q9CYQ5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.61■□□□□ 0.73
Hcfc1r1Q9CYQ5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hcfc1r1Q9CYQ5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hcfc1r1Q9CYQ5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hcfc1r1Q9CYQ5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hcfc1r1Q9CYQ5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Hcfc1r1Q9CYQ5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.59■□□□□ 0.73
Hcfc1r1Q9CYQ5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hcfc1r1Q9CYQ5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Hcfc1r1Q9CYQ5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.58■□□□□ 0.72
Hcfc1r1Q9CYQ5 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.58■□□□□ 0.72
Hcfc1r1Q9CYQ5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hcfc1r1Q9CYQ5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hcfc1r1Q9CYQ5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Hcfc1r1Q9CYQ5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hcfc1r1Q9CYQ5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hcfc1r1Q9CYQ5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.57■□□□□ 0.72
Hcfc1r1Q9CYQ5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hcfc1r1Q9CYQ5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hcfc1r1Q9CYQ5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hcfc1r1Q9CYQ5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hcfc1r1Q9CYQ5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Hcfc1r1Q9CYQ5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hcfc1r1Q9CYQ5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hcfc1r1Q9CYQ5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcfc1r1Q9CYQ5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcfc1r1Q9CYQ5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcfc1r1Q9CYQ5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcfc1r1Q9CYQ5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms