Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf138Q9CQE0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.7■■□□□ 1.06
Rnf138Q9CQE0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf138Q9CQE0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf138Q9CQE0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf138Q9CQE0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf138Q9CQE0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf138Q9CQE0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Gm27502-201ENSMUST00000183495 199 ntBASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf138Q9CQE0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf138Q9CQE0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.67■■□□□ 1.06
Rnf138Q9CQE0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf138Q9CQE0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf138Q9CQE0 Gm14523-201ENSMUST00000117260 558 ntBASIC21.66■■□□□ 1.06
Rnf138Q9CQE0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf138Q9CQE0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf138Q9CQE0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf138Q9CQE0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf138Q9CQE0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf138Q9CQE0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf138Q9CQE0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf138Q9CQE0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf138Q9CQE0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.64■■□□□ 1.05
Rnf138Q9CQE0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf138Q9CQE0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf138Q9CQE0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf138Q9CQE0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf138Q9CQE0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rnf138Q9CQE0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf138Q9CQE0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf138Q9CQE0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf138Q9CQE0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf138Q9CQE0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf138Q9CQE0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf138Q9CQE0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf138Q9CQE0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf138Q9CQE0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.62■■□□□ 1.05
Rnf138Q9CQE0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf138Q9CQE0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Rnf138Q9CQE0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.61■■□□□ 1.05
Rnf138Q9CQE0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf138Q9CQE0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
Rnf138Q9CQE0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.6■■□□□ 1.05
Rnf138Q9CQE0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.6■■□□□ 1.05
Rnf138Q9CQE0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf138Q9CQE0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf138Q9CQE0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf138Q9CQE0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Rnf138Q9CQE0 Gm7332-201ENSMUST00000118351 454 ntBASIC21.59■■□□□ 1.05
Rnf138Q9CQE0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Rnf138Q9CQE0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Rnf138Q9CQE0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.58■■□□□ 1.05
Rnf138Q9CQE0 Gm44428-201ENSMUST00000204474 874 ntBASIC21.58■■□□□ 1.05
Rnf138Q9CQE0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf138Q9CQE0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rnf138Q9CQE0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf138Q9CQE0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf138Q9CQE0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf138Q9CQE0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Rnf138Q9CQE0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf138Q9CQE0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf138Q9CQE0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.56■■□□□ 1.04
Rnf138Q9CQE0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf138Q9CQE0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Rnf138Q9CQE0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf138Q9CQE0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Rnf138Q9CQE0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf138Q9CQE0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.53■■□□□ 1.04
Rnf138Q9CQE0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Rnf138Q9CQE0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf138Q9CQE0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Rnf138Q9CQE0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf138Q9CQE0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf138Q9CQE0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf138Q9CQE0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.52■■□□□ 1.04
Rnf138Q9CQE0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.03
Rnf138Q9CQE0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.51■■□□□ 1.03
Rnf138Q9CQE0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Rnf138Q9CQE0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.5■■□□□ 1.03
Rnf138Q9CQE0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.5■■□□□ 1.03
Rnf138Q9CQE0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf138Q9CQE0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf138Q9CQE0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf138Q9CQE0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms