Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf138Q9CQE0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.7■■□□□ 1.06
Rnf138Q9CQE0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf138Q9CQE0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf138Q9CQE0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf138Q9CQE0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf138Q9CQE0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf138Q9CQE0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Gm27502-201ENSMUST00000183495 199 ntBASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Rnf138Q9CQE0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf138Q9CQE0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf138Q9CQE0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.67■■□□□ 1.06
Rnf138Q9CQE0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf138Q9CQE0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf138Q9CQE0 Gm14523-201ENSMUST00000117260 558 ntBASIC21.66■■□□□ 1.06
Rnf138Q9CQE0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf138Q9CQE0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf138Q9CQE0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf138Q9CQE0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf138Q9CQE0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf138Q9CQE0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf138Q9CQE0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf138Q9CQE0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf138Q9CQE0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.64■■□□□ 1.05
Rnf138Q9CQE0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf138Q9CQE0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf138Q9CQE0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf138Q9CQE0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf138Q9CQE0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rnf138Q9CQE0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf138Q9CQE0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf138Q9CQE0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf138Q9CQE0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf138Q9CQE0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf138Q9CQE0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf138Q9CQE0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf138Q9CQE0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf138Q9CQE0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.62■■□□□ 1.05
Rnf138Q9CQE0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rnf138Q9CQE0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Rnf138Q9CQE0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.61■■□□□ 1.05
Rnf138Q9CQE0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rnf138Q9CQE0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
Rnf138Q9CQE0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.6■■□□□ 1.05
Rnf138Q9CQE0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.6■■□□□ 1.05
Rnf138Q9CQE0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rnf138Q9CQE0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf138Q9CQE0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rnf138Q9CQE0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Rnf138Q9CQE0 Gm7332-201ENSMUST00000118351 454 ntBASIC21.59■■□□□ 1.05
Rnf138Q9CQE0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Rnf138Q9CQE0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Rnf138Q9CQE0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.58■■□□□ 1.05
Rnf138Q9CQE0 Gm44428-201ENSMUST00000204474 874 ntBASIC21.58■■□□□ 1.05
Rnf138Q9CQE0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rnf138Q9CQE0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rnf138Q9CQE0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf138Q9CQE0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf138Q9CQE0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf138Q9CQE0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Rnf138Q9CQE0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rnf138Q9CQE0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rnf138Q9CQE0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.56■■□□□ 1.04
Rnf138Q9CQE0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rnf138Q9CQE0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Rnf138Q9CQE0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rnf138Q9CQE0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf138Q9CQE0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Rnf138Q9CQE0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf138Q9CQE0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.53■■□□□ 1.04
Rnf138Q9CQE0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Rnf138Q9CQE0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rnf138Q9CQE0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Rnf138Q9CQE0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf138Q9CQE0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf138Q9CQE0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnf138Q9CQE0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.52■■□□□ 1.04
Rnf138Q9CQE0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.03
Rnf138Q9CQE0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.51■■□□□ 1.03
Rnf138Q9CQE0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Rnf138Q9CQE0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.5■■□□□ 1.03
Rnf138Q9CQE0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.5■■□□□ 1.03
Rnf138Q9CQE0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf138Q9CQE0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf138Q9CQE0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rnf138Q9CQE0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms