Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.94■□□□□ 0.78
Scrt1Q99M85 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scrt1Q99M85 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scrt1Q99M85 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scrt1Q99M85 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scrt1Q99M85 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scrt1Q99M85 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scrt1Q99M85 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Scrt1Q99M85 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scrt1Q99M85 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scrt1Q99M85 Gm5921-201ENSMUST00000075898 882 ntBASIC19.92■□□□□ 0.78
Scrt1Q99M85 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scrt1Q99M85 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scrt1Q99M85 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scrt1Q99M85 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scrt1Q99M85 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scrt1Q99M85 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Scrt1Q99M85 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Scrt1Q99M85 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scrt1Q99M85 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Scrt1Q99M85 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Scrt1Q99M85 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.89■□□□□ 0.77
Scrt1Q99M85 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Scrt1Q99M85 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.89■□□□□ 0.77
Scrt1Q99M85 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Scrt1Q99M85 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scrt1Q99M85 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scrt1Q99M85 Gm15546-201ENSMUST00000122095 826 ntBASIC19.88■□□□□ 0.77
Scrt1Q99M85 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scrt1Q99M85 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scrt1Q99M85 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scrt1Q99M85 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scrt1Q99M85 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.87■□□□□ 0.77
Scrt1Q99M85 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.87■□□□□ 0.77
Scrt1Q99M85 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scrt1Q99M85 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Scrt1Q99M85 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scrt1Q99M85 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scrt1Q99M85 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scrt1Q99M85 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scrt1Q99M85 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scrt1Q99M85 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scrt1Q99M85 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.84■□□□□ 0.77
Scrt1Q99M85 Gm9812-201ENSMUST00000061934 968 ntBASIC19.84■□□□□ 0.77
Scrt1Q99M85 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scrt1Q99M85 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Scrt1Q99M85 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Scrt1Q99M85 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
Scrt1Q99M85 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scrt1Q99M85 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scrt1Q99M85 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scrt1Q99M85 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Scrt1Q99M85 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.82■□□□□ 0.76
Scrt1Q99M85 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.82■□□□□ 0.76
Scrt1Q99M85 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Scrt1Q99M85 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scrt1Q99M85 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.81■□□□□ 0.76
Scrt1Q99M85 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.81■□□□□ 0.76
Scrt1Q99M85 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scrt1Q99M85 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Scrt1Q99M85 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scrt1Q99M85 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scrt1Q99M85 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Scrt1Q99M85 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Scrt1Q99M85 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.78■□□□□ 0.76
Scrt1Q99M85 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Scrt1Q99M85 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scrt1Q99M85 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Scrt1Q99M85 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scrt1Q99M85 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.77■□□□□ 0.76
Scrt1Q99M85 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Scrt1Q99M85 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scrt1Q99M85 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scrt1Q99M85 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Scrt1Q99M85 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.76■□□□□ 0.75
Scrt1Q99M85 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scrt1Q99M85 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.76■□□□□ 0.75
Scrt1Q99M85 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Scrt1Q99M85 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.76■□□□□ 0.75
Scrt1Q99M85 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Scrt1Q99M85 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Scrt1Q99M85 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scrt1Q99M85 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scrt1Q99M85 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.75■□□□□ 0.75
Scrt1Q99M85 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scrt1Q99M85 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scrt1Q99M85 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Scrt1Q99M85 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scrt1Q99M85 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.74■□□□□ 0.75
Scrt1Q99M85 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.74■□□□□ 0.75
Scrt1Q99M85 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scrt1Q99M85 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.74■□□□□ 0.75
Scrt1Q99M85 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scrt1Q99M85 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scrt1Q99M85 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Scrt1Q99M85 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.73■□□□□ 0.75
Scrt1Q99M85 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scrt1Q99M85 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scrt1Q99M85 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.72■□□□□ 0.75
Scrt1Q99M85 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms