Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdhb22Q91XZ8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdhb22Q91XZ8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhb22Q91XZ8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhb22Q91XZ8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhb22Q91XZ8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdhb22Q91XZ8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdhb22Q91XZ8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdhb22Q91XZ8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.71■■□□□ 1.87
Pcdhb22Q91XZ8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Pcdhb22Q91XZ8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhb22Q91XZ8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhb22Q91XZ8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
Pcdhb22Q91XZ8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhb22Q91XZ8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhb22Q91XZ8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
Pcdhb22Q91XZ8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.68■■□□□ 1.86
Pcdhb22Q91XZ8 Terc-201ENSMUST00000082862 423 ntBASIC26.68■■□□□ 1.86
Pcdhb22Q91XZ8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdhb22Q91XZ8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdhb22Q91XZ8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdhb22Q91XZ8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.67■■□□□ 1.86
Pcdhb22Q91XZ8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdhb22Q91XZ8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.66■■□□□ 1.86
Pcdhb22Q91XZ8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdhb22Q91XZ8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdhb22Q91XZ8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhb22Q91XZ8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhb22Q91XZ8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdhb22Q91XZ8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdhb22Q91XZ8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdhb22Q91XZ8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdhb22Q91XZ8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.62■■□□□ 1.85
Pcdhb22Q91XZ8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdhb22Q91XZ8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdhb22Q91XZ8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
Pcdhb22Q91XZ8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhb22Q91XZ8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhb22Q91XZ8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.61■■□□□ 1.85
Pcdhb22Q91XZ8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhb22Q91XZ8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhb22Q91XZ8 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.6■■□□□ 1.85
Pcdhb22Q91XZ8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.6■■□□□ 1.85
Pcdhb22Q91XZ8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdhb22Q91XZ8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdhb22Q91XZ8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhb22Q91XZ8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhb22Q91XZ8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhb22Q91XZ8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhb22Q91XZ8 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.58■■□□□ 1.85
Pcdhb22Q91XZ8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
Pcdhb22Q91XZ8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhb22Q91XZ8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhb22Q91XZ8 Scarna2-201ENSMUST00000157560 414 ntBASIC26.57■■□□□ 1.84
Pcdhb22Q91XZ8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.57■■□□□ 1.84
Pcdhb22Q91XZ8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhb22Q91XZ8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhb22Q91XZ8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhb22Q91XZ8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.55■■□□□ 1.84
Pcdhb22Q91XZ8 Gm9806-201ENSMUST00000051080 552 ntBASIC26.55■■□□□ 1.84
Pcdhb22Q91XZ8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb22Q91XZ8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb22Q91XZ8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb22Q91XZ8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb22Q91XZ8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Pcdhb22Q91XZ8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb22Q91XZ8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb22Q91XZ8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb22Q91XZ8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb22Q91XZ8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdhb22Q91XZ8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhb22Q91XZ8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhb22Q91XZ8 Gm16437-201ENSMUST00000025669 507 ntBASIC26.49■■□□□ 1.83
Pcdhb22Q91XZ8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Pcdhb22Q91XZ8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb22Q91XZ8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb22Q91XZ8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb22Q91XZ8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Pcdhb22Q91XZ8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb22Q91XZ8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb22Q91XZ8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Gm11175-201ENSMUST00000116172 543 ntBASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms