Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb8Q91XZ2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb8Q91XZ2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb8Q91XZ2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb8Q91XZ2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb8Q91XZ2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb8Q91XZ2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb8Q91XZ2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Pcdhb8Q91XZ2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb8Q91XZ2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.09■■□□□ 1.13
Pcdhb8Q91XZ2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Pcdhb8Q91XZ2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb8Q91XZ2 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.08■■□□□ 1.13
Pcdhb8Q91XZ2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb8Q91XZ2 Gm7432-201ENSMUST00000210343 879 ntBASIC22.08■■□□□ 1.13
Pcdhb8Q91XZ2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb8Q91XZ2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb8Q91XZ2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb8Q91XZ2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb8Q91XZ2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb8Q91XZ2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb8Q91XZ2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb8Q91XZ2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb8Q91XZ2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Pcdhb8Q91XZ2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.06■■□□□ 1.12
Pcdhb8Q91XZ2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Pcdhb8Q91XZ2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb8Q91XZ2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb8Q91XZ2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.05■■□□□ 1.12
Pcdhb8Q91XZ2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb8Q91XZ2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb8Q91XZ2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb8Q91XZ2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb8Q91XZ2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb8Q91XZ2 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.05■■□□□ 1.12
Pcdhb8Q91XZ2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb8Q91XZ2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb8Q91XZ2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb8Q91XZ2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb8Q91XZ2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb8Q91XZ2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb8Q91XZ2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb8Q91XZ2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb8Q91XZ2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb8Q91XZ2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb8Q91XZ2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb8Q91XZ2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Pcdhb8Q91XZ2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb8Q91XZ2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb8Q91XZ2 Gm11599-201ENSMUST00000118720 878 ntBASIC22.01■■□□□ 1.11
Pcdhb8Q91XZ2 Gm4799-201ENSMUST00000095396 657 ntBASIC22.01■■□□□ 1.11
Pcdhb8Q91XZ2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb8Q91XZ2 Gm13889-201ENSMUST00000099689 1386 ntBASIC22■■□□□ 1.11
Pcdhb8Q91XZ2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb8Q91XZ2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb8Q91XZ2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22■■□□□ 1.11
Pcdhb8Q91XZ2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb8Q91XZ2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.99■■□□□ 1.11
Pcdhb8Q91XZ2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.99■■□□□ 1.11
Pcdhb8Q91XZ2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.99■■□□□ 1.11
Pcdhb8Q91XZ2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb8Q91XZ2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb8Q91XZ2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb8Q91XZ2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb8Q91XZ2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb8Q91XZ2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb8Q91XZ2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb8Q91XZ2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb8Q91XZ2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb8Q91XZ2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Pcdhb8Q91XZ2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.96■■□□□ 1.11
Pcdhb8Q91XZ2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.96■■□□□ 1.11
Pcdhb8Q91XZ2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb8Q91XZ2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb8Q91XZ2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Pcdhb8Q91XZ2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
Pcdhb8Q91XZ2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb8Q91XZ2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb8Q91XZ2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb8Q91XZ2 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.95■■□□□ 1.1
Pcdhb8Q91XZ2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb8Q91XZ2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb8Q91XZ2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Pcdhb8Q91XZ2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Pcdhb8Q91XZ2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.93■■□□□ 1.1
Pcdhb8Q91XZ2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.92■■□□□ 1.1
Pcdhb8Q91XZ2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
Pcdhb8Q91XZ2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb8Q91XZ2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Pcdhb8Q91XZ2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb8Q91XZ2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb8Q91XZ2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Pcdhb8Q91XZ2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb8Q91XZ2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb8Q91XZ2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Pcdhb8Q91XZ2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb8Q91XZ2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb8Q91XZ2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb8Q91XZ2 Mir3960-201ENSMUST00000198213 73 ntBASIC21.9■■□□□ 1.1
Pcdhb8Q91XZ2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 324.9 ms