Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhga9Q91XX9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhga9Q91XX9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhga9Q91XX9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhga9Q91XX9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhga9Q91XX9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhga9Q91XX9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhga9Q91XX9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhga9Q91XX9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhga9Q91XX9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhga9Q91XX9 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.43■■□□□ 1.18
Pcdhga9Q91XX9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
Pcdhga9Q91XX9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Pcdhga9Q91XX9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga9Q91XX9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.42■■□□□ 1.18
Pcdhga9Q91XX9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga9Q91XX9 Gm9812-201ENSMUST00000061934 968 ntBASIC22.42■■□□□ 1.18
Pcdhga9Q91XX9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga9Q91XX9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga9Q91XX9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga9Q91XX9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhga9Q91XX9 Gm45364-201ENSMUST00000210883 159 ntBASIC22.41■■□□□ 1.18
Pcdhga9Q91XX9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhga9Q91XX9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.41■■□□□ 1.18
Pcdhga9Q91XX9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhga9Q91XX9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhga9Q91XX9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.4■■□□□ 1.18
Pcdhga9Q91XX9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.4■■□□□ 1.18
Pcdhga9Q91XX9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhga9Q91XX9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhga9Q91XX9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhga9Q91XX9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Pcdhga9Q91XX9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.38■■□□□ 1.17
Pcdhga9Q91XX9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhga9Q91XX9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhga9Q91XX9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhga9Q91XX9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.38■■□□□ 1.17
Pcdhga9Q91XX9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhga9Q91XX9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.37■■□□□ 1.17
Pcdhga9Q91XX9 Scarna2-201ENSMUST00000157560 414 ntBASIC22.37■■□□□ 1.17
Pcdhga9Q91XX9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhga9Q91XX9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.37■■□□□ 1.17
Pcdhga9Q91XX9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhga9Q91XX9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhga9Q91XX9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhga9Q91XX9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhga9Q91XX9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.36■■□□□ 1.17
Pcdhga9Q91XX9 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.36■■□□□ 1.17
Pcdhga9Q91XX9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Pcdhga9Q91XX9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhga9Q91XX9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhga9Q91XX9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhga9Q91XX9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Pcdhga9Q91XX9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Pcdhga9Q91XX9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.34■■□□□ 1.17
Pcdhga9Q91XX9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhga9Q91XX9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhga9Q91XX9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhga9Q91XX9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhga9Q91XX9 Gm11687-201ENSMUST00000118911 886 ntBASIC22.33■■□□□ 1.17
Pcdhga9Q91XX9 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.33■■□□□ 1.17
Pcdhga9Q91XX9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhga9Q91XX9 Gm9806-201ENSMUST00000051080 552 ntBASIC22.33■■□□□ 1.17
Pcdhga9Q91XX9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhga9Q91XX9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhga9Q91XX9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhga9Q91XX9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.32■■□□□ 1.16
Pcdhga9Q91XX9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhga9Q91XX9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhga9Q91XX9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhga9Q91XX9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga9Q91XX9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga9Q91XX9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga9Q91XX9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga9Q91XX9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga9Q91XX9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga9Q91XX9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga9Q91XX9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga9Q91XX9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhga9Q91XX9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhga9Q91XX9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhga9Q91XX9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Pcdhga9Q91XX9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhga9Q91XX9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhga9Q91XX9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.28■■□□□ 1.16
Pcdhga9Q91XX9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhga9Q91XX9 Gm16437-201ENSMUST00000025669 507 ntBASIC22.27■■□□□ 1.16
Pcdhga9Q91XX9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhga9Q91XX9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhga9Q91XX9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhga9Q91XX9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhga9Q91XX9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.26■■□□□ 1.15
Pcdhga9Q91XX9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.26■■□□□ 1.15
Pcdhga9Q91XX9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhga9Q91XX9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhga9Q91XX9 Terc-201ENSMUST00000082862 423 ntBASIC22.25■■□□□ 1.15
Pcdhga9Q91XX9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhga9Q91XX9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.24■■□□□ 1.15
Pcdhga9Q91XX9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhga9Q91XX9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms