Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhgb4Q91XX6 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.04■■□□□ 1.44
Pcdhgb4Q91XX6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhgb4Q91XX6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Pcdhgb4Q91XX6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhgb4Q91XX6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhgb4Q91XX6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhgb4Q91XX6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhgb4Q91XX6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhgb4Q91XX6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhgb4Q91XX6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhgb4Q91XX6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcdhgb4Q91XX6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhgb4Q91XX6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhgb4Q91XX6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhgb4Q91XX6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhgb4Q91XX6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhgb4Q91XX6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcdhgb4Q91XX6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Pcdhgb4Q91XX6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhgb4Q91XX6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhgb4Q91XX6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhgb4Q91XX6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhgb4Q91XX6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhgb4Q91XX6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhgb4Q91XX6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.98■■□□□ 1.43
Pcdhgb4Q91XX6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhgb4Q91XX6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhgb4Q91XX6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhgb4Q91XX6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.97■■□□□ 1.43
Pcdhgb4Q91XX6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
Pcdhgb4Q91XX6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhgb4Q91XX6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.96■■□□□ 1.43
Pcdhgb4Q91XX6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhgb4Q91XX6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Pcdhgb4Q91XX6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Pcdhgb4Q91XX6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhgb4Q91XX6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhgb4Q91XX6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhgb4Q91XX6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhgb4Q91XX6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhgb4Q91XX6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.93■■□□□ 1.42
Pcdhgb4Q91XX6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhgb4Q91XX6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhgb4Q91XX6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhgb4Q91XX6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhgb4Q91XX6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Pcdhgb4Q91XX6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhgb4Q91XX6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhgb4Q91XX6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhgb4Q91XX6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhgb4Q91XX6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhgb4Q91XX6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhgb4Q91XX6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhgb4Q91XX6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.91■■□□□ 1.42
Pcdhgb4Q91XX6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhgb4Q91XX6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhgb4Q91XX6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhgb4Q91XX6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhgb4Q91XX6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhgb4Q91XX6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhgb4Q91XX6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhgb4Q91XX6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdhgb4Q91XX6 Gm7432-201ENSMUST00000210343 879 ntBASIC23.89■■□□□ 1.41
Pcdhgb4Q91XX6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdhgb4Q91XX6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Pcdhgb4Q91XX6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Pcdhgb4Q91XX6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Pcdhgb4Q91XX6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.88■■□□□ 1.41
Pcdhgb4Q91XX6 Gm4799-201ENSMUST00000095396 657 ntBASIC23.88■■□□□ 1.41
Pcdhgb4Q91XX6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhgb4Q91XX6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb4Q91XX6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb4Q91XX6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb4Q91XX6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb4Q91XX6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb4Q91XX6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb4Q91XX6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb4Q91XX6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhgb4Q91XX6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.86■■□□□ 1.41
Pcdhgb4Q91XX6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.85■■□□□ 1.41
Pcdhgb4Q91XX6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhgb4Q91XX6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhgb4Q91XX6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhgb4Q91XX6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhgb4Q91XX6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Pcdhgb4Q91XX6 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.84■■□□□ 1.41
Pcdhgb4Q91XX6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
Pcdhgb4Q91XX6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhgb4Q91XX6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhgb4Q91XX6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhgb4Q91XX6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhgb4Q91XX6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhgb4Q91XX6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhgb4Q91XX6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhgb4Q91XX6 Gm11599-201ENSMUST00000118720 878 ntBASIC23.82■■□□□ 1.4
Pcdhgb4Q91XX6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.82■■□□□ 1.4
Pcdhgb4Q91XX6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhgb4Q91XX6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Pcdhgb4Q91XX6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms