Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Vsx1Q91V10 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Vsx1Q91V10 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.67■■□□□ 1.22
Vsx1Q91V10 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vsx1Q91V10 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Vsx1Q91V10 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vsx1Q91V10 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vsx1Q91V10 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Vsx1Q91V10 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Vsx1Q91V10 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Vsx1Q91V10 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.64■■□□□ 1.21
Vsx1Q91V10 Gm15820-201ENSMUST00000201566 728 ntBASIC22.64■■□□□ 1.21
Vsx1Q91V10 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Vsx1Q91V10 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Vsx1Q91V10 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Vsx1Q91V10 Gm13238-201ENSMUST00000117655 780 ntBASIC22.63■■□□□ 1.21
Vsx1Q91V10 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Vsx1Q91V10 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.63■■□□□ 1.21
Vsx1Q91V10 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Vsx1Q91V10 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.62■■□□□ 1.21
Vsx1Q91V10 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Vsx1Q91V10 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Vsx1Q91V10 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.62■■□□□ 1.21
Vsx1Q91V10 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Vsx1Q91V10 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Vsx1Q91V10 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Vsx1Q91V10 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
Vsx1Q91V10 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Vsx1Q91V10 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Vsx1Q91V10 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Vsx1Q91V10 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Vsx1Q91V10 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Vsx1Q91V10 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Vsx1Q91V10 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Vsx1Q91V10 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Vsx1Q91V10 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Vsx1Q91V10 Terc-201ENSMUST00000082862 423 ntBASIC22.59■■□□□ 1.21
Vsx1Q91V10 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Vsx1Q91V10 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Vsx1Q91V10 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Vsx1Q91V10 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.57■■□□□ 1.2
Vsx1Q91V10 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vsx1Q91V10 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Vsx1Q91V10 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Vsx1Q91V10 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Vsx1Q91V10 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.56■■□□□ 1.2
Vsx1Q91V10 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vsx1Q91V10 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.55■■□□□ 1.2
Vsx1Q91V10 Gm45102-201ENSMUST00000207427 857 ntBASIC22.55■■□□□ 1.2
Vsx1Q91V10 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vsx1Q91V10 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Vsx1Q91V10 Gm14117-201ENSMUST00000122417 843 ntBASIC22.54■■□□□ 1.2
Vsx1Q91V10 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vsx1Q91V10 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vsx1Q91V10 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Vsx1Q91V10 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vsx1Q91V10 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Vsx1Q91V10 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vsx1Q91V10 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vsx1Q91V10 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Vsx1Q91V10 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vsx1Q91V10 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vsx1Q91V10 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vsx1Q91V10 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vsx1Q91V10 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vsx1Q91V10 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.51■■□□□ 1.19
Vsx1Q91V10 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Vsx1Q91V10 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.5■■□□□ 1.19
Vsx1Q91V10 Gm43566-201ENSMUST00000196851 808 ntBASIC22.5■■□□□ 1.19
Vsx1Q91V10 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Vsx1Q91V10 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.49■■□□□ 1.19
Vsx1Q91V10 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Vsx1Q91V10 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vsx1Q91V10 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vsx1Q91V10 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.48■■□□□ 1.19
Vsx1Q91V10 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.48■■□□□ 1.19
Vsx1Q91V10 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vsx1Q91V10 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.48■■□□□ 1.19
Vsx1Q91V10 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
Vsx1Q91V10 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vsx1Q91V10 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.48■■□□□ 1.19
Vsx1Q91V10 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.48■■□□□ 1.19
Vsx1Q91V10 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vsx1Q91V10 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Vsx1Q91V10 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.47■■□□□ 1.19
Vsx1Q91V10 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.47■■□□□ 1.19
Vsx1Q91V10 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vsx1Q91V10 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vsx1Q91V10 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vsx1Q91V10 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vsx1Q91V10 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Vsx1Q91V10 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.46■■□□□ 1.19
Vsx1Q91V10 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
Vsx1Q91V10 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Vsx1Q91V10 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.45■■□□□ 1.18
Vsx1Q91V10 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Vsx1Q91V10 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Vsx1Q91V10 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.44■■□□□ 1.18
Vsx1Q91V10 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Vsx1Q91V10 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms