Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab40cQ8VHQ4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.52■□□□□ 0.56
Rab40cQ8VHQ4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.52■□□□□ 0.56
Rab40cQ8VHQ4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab40cQ8VHQ4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab40cQ8VHQ4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rab40cQ8VHQ4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab40cQ8VHQ4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab40cQ8VHQ4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rab40cQ8VHQ4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rab40cQ8VHQ4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab40cQ8VHQ4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.51■□□□□ 0.55
Rab40cQ8VHQ4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab40cQ8VHQ4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab40cQ8VHQ4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab40cQ8VHQ4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab40cQ8VHQ4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rab40cQ8VHQ4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rab40cQ8VHQ4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rab40cQ8VHQ4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.49■□□□□ 0.55
Rab40cQ8VHQ4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.49■□□□□ 0.55
Rab40cQ8VHQ4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab40cQ8VHQ4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rab40cQ8VHQ4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab40cQ8VHQ4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rab40cQ8VHQ4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.48■□□□□ 0.55
Rab40cQ8VHQ4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rab40cQ8VHQ4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rab40cQ8VHQ4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab40cQ8VHQ4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab40cQ8VHQ4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab40cQ8VHQ4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab40cQ8VHQ4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Rab40cQ8VHQ4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rab40cQ8VHQ4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Rab40cQ8VHQ4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rab40cQ8VHQ4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rab40cQ8VHQ4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Rab40cQ8VHQ4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rab40cQ8VHQ4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab40cQ8VHQ4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab40cQ8VHQ4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab40cQ8VHQ4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rab40cQ8VHQ4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab40cQ8VHQ4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rab40cQ8VHQ4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.45■□□□□ 0.54
Rab40cQ8VHQ4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rab40cQ8VHQ4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rab40cQ8VHQ4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40cQ8VHQ4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40cQ8VHQ4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40cQ8VHQ4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rab40cQ8VHQ4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40cQ8VHQ4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rab40cQ8VHQ4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40cQ8VHQ4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40cQ8VHQ4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rab40cQ8VHQ4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40cQ8VHQ4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40cQ8VHQ4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40cQ8VHQ4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40cQ8VHQ4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.43■□□□□ 0.54
Rab40cQ8VHQ4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rab40cQ8VHQ4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.43■□□□□ 0.54
Rab40cQ8VHQ4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rab40cQ8VHQ4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab40cQ8VHQ4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.42■□□□□ 0.54
Rab40cQ8VHQ4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rab40cQ8VHQ4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rab40cQ8VHQ4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Rab40cQ8VHQ4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab40cQ8VHQ4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rab40cQ8VHQ4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab40cQ8VHQ4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rab40cQ8VHQ4 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.41■□□□□ 0.54
Rab40cQ8VHQ4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Rab40cQ8VHQ4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab40cQ8VHQ4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rab40cQ8VHQ4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rab40cQ8VHQ4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rab40cQ8VHQ4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab40cQ8VHQ4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rab40cQ8VHQ4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rab40cQ8VHQ4 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.4■□□□□ 0.54
Rab40cQ8VHQ4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rab40cQ8VHQ4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rab40cQ8VHQ4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.39■□□□□ 0.53
Rab40cQ8VHQ4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab40cQ8VHQ4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab40cQ8VHQ4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rab40cQ8VHQ4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab40cQ8VHQ4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rab40cQ8VHQ4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab40cQ8VHQ4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab40cQ8VHQ4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rab40cQ8VHQ4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rab40cQ8VHQ4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab40cQ8VHQ4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab40cQ8VHQ4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rab40cQ8VHQ4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms