Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retreg1dQ8VE91 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.33■■□□□ 1.16
Retreg1dQ8VE91 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Retreg1dQ8VE91 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retreg1dQ8VE91 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retreg1dQ8VE91 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.32■■□□□ 1.16
Retreg1dQ8VE91 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retreg1dQ8VE91 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retreg1dQ8VE91 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.31■■□□□ 1.16
Retreg1dQ8VE91 Gm9812-201ENSMUST00000061934 968 ntBASIC22.31■■□□□ 1.16
Retreg1dQ8VE91 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.3■■□□□ 1.16
Retreg1dQ8VE91 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Retreg1dQ8VE91 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Retreg1dQ8VE91 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.3■■□□□ 1.16
Retreg1dQ8VE91 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retreg1dQ8VE91 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retreg1dQ8VE91 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retreg1dQ8VE91 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.29■■□□□ 1.16
Retreg1dQ8VE91 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.29■■□□□ 1.16
Retreg1dQ8VE91 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Retreg1dQ8VE91 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retreg1dQ8VE91 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retreg1dQ8VE91 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retreg1dQ8VE91 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retreg1dQ8VE91 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retreg1dQ8VE91 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.27■■□□□ 1.16
Retreg1dQ8VE91 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Retreg1dQ8VE91 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.26■■□□□ 1.15
Retreg1dQ8VE91 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retreg1dQ8VE91 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retreg1dQ8VE91 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.26■■□□□ 1.15
Retreg1dQ8VE91 Gm12366-201ENSMUST00000121722 873 ntBASIC22.26■■□□□ 1.15
Retreg1dQ8VE91 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.26■■□□□ 1.15
Retreg1dQ8VE91 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retreg1dQ8VE91 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.26■■□□□ 1.15
Retreg1dQ8VE91 Gm5786-201ENSMUST00000085368 882 ntBASIC22.26■■□□□ 1.15
Retreg1dQ8VE91 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Retreg1dQ8VE91 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retreg1dQ8VE91 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retreg1dQ8VE91 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Retreg1dQ8VE91 Gm27502-201ENSMUST00000183495 199 ntBASIC22.25■■□□□ 1.15
Retreg1dQ8VE91 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retreg1dQ8VE91 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retreg1dQ8VE91 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Retreg1dQ8VE91 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retreg1dQ8VE91 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retreg1dQ8VE91 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.24■■□□□ 1.15
Retreg1dQ8VE91 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retreg1dQ8VE91 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.24■■□□□ 1.15
Retreg1dQ8VE91 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Retreg1dQ8VE91 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
Retreg1dQ8VE91 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retreg1dQ8VE91 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Retreg1dQ8VE91 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.23■■□□□ 1.15
Retreg1dQ8VE91 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retreg1dQ8VE91 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retreg1dQ8VE91 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
Retreg1dQ8VE91 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retreg1dQ8VE91 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Retreg1dQ8VE91 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retreg1dQ8VE91 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Retreg1dQ8VE91 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retreg1dQ8VE91 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retreg1dQ8VE91 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retreg1dQ8VE91 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retreg1dQ8VE91 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retreg1dQ8VE91 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retreg1dQ8VE91 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retreg1dQ8VE91 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retreg1dQ8VE91 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retreg1dQ8VE91 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retreg1dQ8VE91 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retreg1dQ8VE91 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retreg1dQ8VE91 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retreg1dQ8VE91 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Retreg1dQ8VE91 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retreg1dQ8VE91 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retreg1dQ8VE91 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Retreg1dQ8VE91 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Retreg1dQ8VE91 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Retreg1dQ8VE91 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Retreg1dQ8VE91 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Retreg1dQ8VE91 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retreg1dQ8VE91 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retreg1dQ8VE91 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Retreg1dQ8VE91 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retreg1dQ8VE91 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.16■■□□□ 1.14
Retreg1dQ8VE91 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retreg1dQ8VE91 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retreg1dQ8VE91 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retreg1dQ8VE91 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retreg1dQ8VE91 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retreg1dQ8VE91 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.15■■□□□ 1.14
Retreg1dQ8VE91 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Retreg1dQ8VE91 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Retreg1dQ8VE91 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Retreg1dQ8VE91 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retreg1dQ8VE91 Terc-201ENSMUST00000082862 423 ntBASIC22.14■■□□□ 1.13
Retreg1dQ8VE91 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retreg1dQ8VE91 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms