Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Sh3kbp1Q8R550 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sh3kbp1Q8R550 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Sh3kbp1Q8R550 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Sh3kbp1Q8R550 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.33■■□□□ 1.32
Sh3kbp1Q8R550 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Sh3kbp1Q8R550 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.33■■□□□ 1.32
Sh3kbp1Q8R550 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3kbp1Q8R550 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.31■■□□□ 1.32
Sh3kbp1Q8R550 Gm27502-201ENSMUST00000183495 199 ntBASIC23.31■■□□□ 1.32
Sh3kbp1Q8R550 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.31■■□□□ 1.32
Sh3kbp1Q8R550 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sh3kbp1Q8R550 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sh3kbp1Q8R550 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sh3kbp1Q8R550 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Sh3kbp1Q8R550 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.3■■□□□ 1.32
Sh3kbp1Q8R550 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Sh3kbp1Q8R550 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sh3kbp1Q8R550 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sh3kbp1Q8R550 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3kbp1Q8R550 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3kbp1Q8R550 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3kbp1Q8R550 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3kbp1Q8R550 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3kbp1Q8R550 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
Sh3kbp1Q8R550 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3kbp1Q8R550 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3kbp1Q8R550 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3kbp1Q8R550 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3kbp1Q8R550 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3kbp1Q8R550 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3kbp1Q8R550 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3kbp1Q8R550 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3kbp1Q8R550 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3kbp1Q8R550 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3kbp1Q8R550 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3kbp1Q8R550 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3kbp1Q8R550 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3kbp1Q8R550 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3kbp1Q8R550 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3kbp1Q8R550 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3kbp1Q8R550 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3kbp1Q8R550 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3kbp1Q8R550 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sh3kbp1Q8R550 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Sh3kbp1Q8R550 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.22■■□□□ 1.31
Sh3kbp1Q8R550 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Sh3kbp1Q8R550 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3kbp1Q8R550 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3kbp1Q8R550 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3kbp1Q8R550 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3kbp1Q8R550 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Sh3kbp1Q8R550 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3kbp1Q8R550 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3kbp1Q8R550 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3kbp1Q8R550 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3kbp1Q8R550 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3kbp1Q8R550 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3kbp1Q8R550 Gm9812-201ENSMUST00000061934 968 ntBASIC23.18■■□□□ 1.3
Sh3kbp1Q8R550 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.18■■□□□ 1.3
Sh3kbp1Q8R550 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3kbp1Q8R550 Gm7332-201ENSMUST00000118351 454 ntBASIC23.17■■□□□ 1.3
Sh3kbp1Q8R550 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3kbp1Q8R550 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3kbp1Q8R550 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3kbp1Q8R550 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3kbp1Q8R550 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Sh3kbp1Q8R550 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Sh3kbp1Q8R550 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms