Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cuedc1Q8R3V6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cuedc1Q8R3V6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cuedc1Q8R3V6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.43■□□□□ 0.86
Cuedc1Q8R3V6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cuedc1Q8R3V6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cuedc1Q8R3V6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cuedc1Q8R3V6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cuedc1Q8R3V6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cuedc1Q8R3V6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.41■□□□□ 0.86
Cuedc1Q8R3V6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cuedc1Q8R3V6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.41■□□□□ 0.86
Cuedc1Q8R3V6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cuedc1Q8R3V6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cuedc1Q8R3V6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Cuedc1Q8R3V6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cuedc1Q8R3V6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Cuedc1Q8R3V6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cuedc1Q8R3V6 Gm10420-201ENSMUST00000121713 882 ntBASIC20.4■□□□□ 0.86
Cuedc1Q8R3V6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.4■□□□□ 0.86
Cuedc1Q8R3V6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cuedc1Q8R3V6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cuedc1Q8R3V6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cuedc1Q8R3V6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cuedc1Q8R3V6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cuedc1Q8R3V6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cuedc1Q8R3V6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cuedc1Q8R3V6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cuedc1Q8R3V6 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.38■□□□□ 0.85
Cuedc1Q8R3V6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cuedc1Q8R3V6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cuedc1Q8R3V6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.37■□□□□ 0.85
Cuedc1Q8R3V6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.37■□□□□ 0.85
Cuedc1Q8R3V6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cuedc1Q8R3V6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cuedc1Q8R3V6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.37■□□□□ 0.85
Cuedc1Q8R3V6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cuedc1Q8R3V6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cuedc1Q8R3V6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cuedc1Q8R3V6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.36■□□□□ 0.85
Cuedc1Q8R3V6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.36■□□□□ 0.85
Cuedc1Q8R3V6 Gm9812-201ENSMUST00000061934 968 ntBASIC20.36■□□□□ 0.85
Cuedc1Q8R3V6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.35■□□□□ 0.85
Cuedc1Q8R3V6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cuedc1Q8R3V6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cuedc1Q8R3V6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cuedc1Q8R3V6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cuedc1Q8R3V6 Gm15546-201ENSMUST00000122095 826 ntBASIC20.34■□□□□ 0.85
Cuedc1Q8R3V6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cuedc1Q8R3V6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cuedc1Q8R3V6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cuedc1Q8R3V6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.32■□□□□ 0.84
Cuedc1Q8R3V6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.32■□□□□ 0.84
Cuedc1Q8R3V6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cuedc1Q8R3V6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cuedc1Q8R3V6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cuedc1Q8R3V6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Cuedc1Q8R3V6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cuedc1Q8R3V6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cuedc1Q8R3V6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cuedc1Q8R3V6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cuedc1Q8R3V6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cuedc1Q8R3V6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cuedc1Q8R3V6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cuedc1Q8R3V6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Cuedc1Q8R3V6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cuedc1Q8R3V6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.28■□□□□ 0.84
Cuedc1Q8R3V6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.28■□□□□ 0.84
Cuedc1Q8R3V6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cuedc1Q8R3V6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.28■□□□□ 0.84
Cuedc1Q8R3V6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.27■□□□□ 0.84
Cuedc1Q8R3V6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cuedc1Q8R3V6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cuedc1Q8R3V6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cuedc1Q8R3V6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cuedc1Q8R3V6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cuedc1Q8R3V6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.26■□□□□ 0.83
Cuedc1Q8R3V6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.26■□□□□ 0.83
Cuedc1Q8R3V6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cuedc1Q8R3V6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cuedc1Q8R3V6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cuedc1Q8R3V6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cuedc1Q8R3V6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cuedc1Q8R3V6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.25■□□□□ 0.83
Cuedc1Q8R3V6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cuedc1Q8R3V6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cuedc1Q8R3V6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cuedc1Q8R3V6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cuedc1Q8R3V6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cuedc1Q8R3V6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cuedc1Q8R3V6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cuedc1Q8R3V6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cuedc1Q8R3V6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cuedc1Q8R3V6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cuedc1Q8R3V6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cuedc1Q8R3V6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cuedc1Q8R3V6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cuedc1Q8R3V6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cuedc1Q8R3V6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cuedc1Q8R3V6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms