Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tm6sf2Q8R1J1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tm6sf2Q8R1J1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tm6sf2Q8R1J1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tm6sf2Q8R1J1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tm6sf2Q8R1J1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tm6sf2Q8R1J1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Tm6sf2Q8R1J1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tm6sf2Q8R1J1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tm6sf2Q8R1J1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tm6sf2Q8R1J1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tm6sf2Q8R1J1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tm6sf2Q8R1J1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.34■■□□□ 1.01
Tm6sf2Q8R1J1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tm6sf2Q8R1J1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tm6sf2Q8R1J1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Tm6sf2Q8R1J1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tm6sf2Q8R1J1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tm6sf2Q8R1J1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tm6sf2Q8R1J1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tm6sf2Q8R1J1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Tm6sf2Q8R1J1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.33■■□□□ 1.01
Tm6sf2Q8R1J1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tm6sf2Q8R1J1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tm6sf2Q8R1J1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tm6sf2Q8R1J1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Tm6sf2Q8R1J1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf2Q8R1J1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf2Q8R1J1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.32■■□□□ 1
Tm6sf2Q8R1J1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf2Q8R1J1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Tm6sf2Q8R1J1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.31■■□□□ 1
Tm6sf2Q8R1J1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf2Q8R1J1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tm6sf2Q8R1J1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Tm6sf2Q8R1J1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tm6sf2Q8R1J1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf2Q8R1J1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf2Q8R1J1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf2Q8R1J1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.29■■□□□ 1
Tm6sf2Q8R1J1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf2Q8R1J1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf2Q8R1J1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tm6sf2Q8R1J1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.29■■□□□ 1
Tm6sf2Q8R1J1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf2Q8R1J1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf2Q8R1J1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.28■■□□□ 1
Tm6sf2Q8R1J1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf2Q8R1J1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf2Q8R1J1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf2Q8R1J1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf2Q8R1J1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tm6sf2Q8R1J1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.27■■□□□ 1
Tm6sf2Q8R1J1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.27■■□□□ 1
Tm6sf2Q8R1J1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tm6sf2Q8R1J1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tm6sf2Q8R1J1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tm6sf2Q8R1J1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tm6sf2Q8R1J1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Tm6sf2Q8R1J1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tm6sf2Q8R1J1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tm6sf2Q8R1J1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tm6sf2Q8R1J1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.25■□□□□ 0.99
Tm6sf2Q8R1J1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tm6sf2Q8R1J1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tm6sf2Q8R1J1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tm6sf2Q8R1J1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tm6sf2Q8R1J1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tm6sf2Q8R1J1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tm6sf2Q8R1J1 Gm27502-201ENSMUST00000183495 199 ntBASIC21.24■□□□□ 0.99
Tm6sf2Q8R1J1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tm6sf2Q8R1J1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.24■□□□□ 0.99
Tm6sf2Q8R1J1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tm6sf2Q8R1J1 Cap2-205ENSMUST00000225824 1634 ntBASIC21.23■□□□□ 0.99
Tm6sf2Q8R1J1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tm6sf2Q8R1J1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tm6sf2Q8R1J1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.23■□□□□ 0.99
Tm6sf2Q8R1J1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tm6sf2Q8R1J1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.22■□□□□ 0.99
Tm6sf2Q8R1J1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.22■□□□□ 0.99
Tm6sf2Q8R1J1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tm6sf2Q8R1J1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tm6sf2Q8R1J1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Tm6sf2Q8R1J1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tm6sf2Q8R1J1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Tm6sf2Q8R1J1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tm6sf2Q8R1J1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Tm6sf2Q8R1J1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Tm6sf2Q8R1J1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tm6sf2Q8R1J1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tm6sf2Q8R1J1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tm6sf2Q8R1J1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Tm6sf2Q8R1J1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.2■□□□□ 0.98
Tm6sf2Q8R1J1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tm6sf2Q8R1J1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Tm6sf2Q8R1J1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tm6sf2Q8R1J1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.19■□□□□ 0.98
Tm6sf2Q8R1J1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tm6sf2Q8R1J1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tm6sf2Q8R1J1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms