Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sh3rf3Q8C120 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Sh3rf3Q8C120 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.66■■□□□ 1.38
Sh3rf3Q8C120 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sh3rf3Q8C120 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sh3rf3Q8C120 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sh3rf3Q8C120 Gm4799-201ENSMUST00000095396 657 ntBASIC23.65■■□□□ 1.38
Sh3rf3Q8C120 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sh3rf3Q8C120 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sh3rf3Q8C120 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sh3rf3Q8C120 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sh3rf3Q8C120 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sh3rf3Q8C120 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Sh3rf3Q8C120 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Sh3rf3Q8C120 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Sh3rf3Q8C120 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.61■■□□□ 1.37
Sh3rf3Q8C120 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Sh3rf3Q8C120 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Sh3rf3Q8C120 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Sh3rf3Q8C120 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sh3rf3Q8C120 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sh3rf3Q8C120 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sh3rf3Q8C120 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sh3rf3Q8C120 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sh3rf3Q8C120 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Sh3rf3Q8C120 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Sh3rf3Q8C120 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.59■■□□□ 1.37
Sh3rf3Q8C120 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Sh3rf3Q8C120 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Sh3rf3Q8C120 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Sh3rf3Q8C120 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sh3rf3Q8C120 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sh3rf3Q8C120 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.57■■□□□ 1.36
Sh3rf3Q8C120 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.57■■□□□ 1.36
Sh3rf3Q8C120 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sh3rf3Q8C120 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Sh3rf3Q8C120 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.56■■□□□ 1.36
Sh3rf3Q8C120 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Sh3rf3Q8C120 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Sh3rf3Q8C120 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.55■■□□□ 1.36
Sh3rf3Q8C120 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Sh3rf3Q8C120 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sh3rf3Q8C120 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sh3rf3Q8C120 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sh3rf3Q8C120 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.54■■□□□ 1.36
Sh3rf3Q8C120 Gm45364-201ENSMUST00000210883 159 ntBASIC23.54■■□□□ 1.36
Sh3rf3Q8C120 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sh3rf3Q8C120 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sh3rf3Q8C120 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Sh3rf3Q8C120 Mir3960-201ENSMUST00000198213 73 ntBASIC23.53■■□□□ 1.36
Sh3rf3Q8C120 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.53■■□□□ 1.36
Sh3rf3Q8C120 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Sh3rf3Q8C120 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Sh3rf3Q8C120 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.52■■□□□ 1.36
Sh3rf3Q8C120 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Sh3rf3Q8C120 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sh3rf3Q8C120 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Sh3rf3Q8C120 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Sh3rf3Q8C120 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.51■■□□□ 1.35
Sh3rf3Q8C120 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh3rf3Q8C120 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh3rf3Q8C120 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh3rf3Q8C120 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sh3rf3Q8C120 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Sh3rf3Q8C120 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.5■■□□□ 1.35
Sh3rf3Q8C120 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Sh3rf3Q8C120 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sh3rf3Q8C120 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sh3rf3Q8C120 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Sh3rf3Q8C120 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sh3rf3Q8C120 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sh3rf3Q8C120 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Sh3rf3Q8C120 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sh3rf3Q8C120 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Sh3rf3Q8C120 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Sh3rf3Q8C120 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sh3rf3Q8C120 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Sh3rf3Q8C120 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.48■■□□□ 1.35
Sh3rf3Q8C120 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sh3rf3Q8C120 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.47■■□□□ 1.35
Sh3rf3Q8C120 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sh3rf3Q8C120 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sh3rf3Q8C120 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.47■■□□□ 1.35
Sh3rf3Q8C120 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Sh3rf3Q8C120 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sh3rf3Q8C120 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.47■■□□□ 1.35
Sh3rf3Q8C120 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.46■■□□□ 1.35
Sh3rf3Q8C120 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.46■■□□□ 1.35
Sh3rf3Q8C120 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Sh3rf3Q8C120 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.45■■□□□ 1.34
Sh3rf3Q8C120 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Sh3rf3Q8C120 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sh3rf3Q8C120 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.44■■□□□ 1.34
Sh3rf3Q8C120 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.44■■□□□ 1.34
Sh3rf3Q8C120 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Sh3rf3Q8C120 Gm9812-201ENSMUST00000061934 968 ntBASIC23.44■■□□□ 1.34
Sh3rf3Q8C120 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sh3rf3Q8C120 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sh3rf3Q8C120 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sh3rf3Q8C120 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms