Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpne4Q8BLR2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne4Q8BLR2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne4Q8BLR2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne4Q8BLR2 Gm11687-201ENSMUST00000118911 886 ntBASIC20.28■□□□□ 0.84
Cpne4Q8BLR2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cpne4Q8BLR2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpne4Q8BLR2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cpne4Q8BLR2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Cpne4Q8BLR2 Mir6538-201ENSMUST00000183713 110 ntBASIC20.27■□□□□ 0.84
Cpne4Q8BLR2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cpne4Q8BLR2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpne4Q8BLR2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpne4Q8BLR2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.27■□□□□ 0.83
Cpne4Q8BLR2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpne4Q8BLR2 Gm11175-201ENSMUST00000116172 543 ntBASIC20.26■□□□□ 0.83
Cpne4Q8BLR2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpne4Q8BLR2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
Cpne4Q8BLR2 Terc-201ENSMUST00000082862 423 ntBASIC20.25■□□□□ 0.83
Cpne4Q8BLR2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Cpne4Q8BLR2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne4Q8BLR2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cpne4Q8BLR2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.24■□□□□ 0.83
Cpne4Q8BLR2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cpne4Q8BLR2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Cpne4Q8BLR2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.23■□□□□ 0.83
Cpne4Q8BLR2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne4Q8BLR2 Gm16437-201ENSMUST00000025669 507 ntBASIC20.23■□□□□ 0.83
Cpne4Q8BLR2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne4Q8BLR2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne4Q8BLR2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne4Q8BLR2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.22■□□□□ 0.83
Cpne4Q8BLR2 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.22■□□□□ 0.83
Cpne4Q8BLR2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cpne4Q8BLR2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cpne4Q8BLR2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne4Q8BLR2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne4Q8BLR2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne4Q8BLR2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne4Q8BLR2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne4Q8BLR2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cpne4Q8BLR2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne4Q8BLR2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne4Q8BLR2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne4Q8BLR2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne4Q8BLR2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpne4Q8BLR2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.2■□□□□ 0.82
Cpne4Q8BLR2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cpne4Q8BLR2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Cpne4Q8BLR2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne4Q8BLR2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne4Q8BLR2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne4Q8BLR2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cpne4Q8BLR2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne4Q8BLR2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne4Q8BLR2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne4Q8BLR2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cpne4Q8BLR2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne4Q8BLR2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne4Q8BLR2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cpne4Q8BLR2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne4Q8BLR2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne4Q8BLR2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne4Q8BLR2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne4Q8BLR2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne4Q8BLR2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne4Q8BLR2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne4Q8BLR2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne4Q8BLR2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cpne4Q8BLR2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne4Q8BLR2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne4Q8BLR2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne4Q8BLR2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne4Q8BLR2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cpne4Q8BLR2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.16■□□□□ 0.82
Cpne4Q8BLR2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne4Q8BLR2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne4Q8BLR2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne4Q8BLR2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne4Q8BLR2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne4Q8BLR2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.15■□□□□ 0.82
Cpne4Q8BLR2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cpne4Q8BLR2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpne4Q8BLR2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.14■□□□□ 0.81
Cpne4Q8BLR2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne4Q8BLR2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne4Q8BLR2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne4Q8BLR2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne4Q8BLR2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne4Q8BLR2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cpne4Q8BLR2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.12■□□□□ 0.81
Cpne4Q8BLR2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cpne4Q8BLR2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.12■□□□□ 0.81
Cpne4Q8BLR2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cpne4Q8BLR2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne4Q8BLR2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.11■□□□□ 0.81
Cpne4Q8BLR2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne4Q8BLR2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne4Q8BLR2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne4Q8BLR2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms