Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Cdkl3Q8BLF2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdkl3Q8BLF2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdkl3Q8BLF2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdkl3Q8BLF2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cdkl3Q8BLF2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdkl3Q8BLF2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdkl3Q8BLF2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cdkl3Q8BLF2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cdkl3Q8BLF2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdkl3Q8BLF2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdkl3Q8BLF2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdkl3Q8BLF2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cdkl3Q8BLF2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdkl3Q8BLF2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Cdkl3Q8BLF2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdkl3Q8BLF2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdkl3Q8BLF2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.55■□□□□ 0.72
Cdkl3Q8BLF2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdkl3Q8BLF2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdkl3Q8BLF2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cdkl3Q8BLF2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdkl3Q8BLF2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdkl3Q8BLF2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdkl3Q8BLF2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdkl3Q8BLF2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdkl3Q8BLF2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cdkl3Q8BLF2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdkl3Q8BLF2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cdkl3Q8BLF2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdkl3Q8BLF2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Cdkl3Q8BLF2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdkl3Q8BLF2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdkl3Q8BLF2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cdkl3Q8BLF2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdkl3Q8BLF2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdkl3Q8BLF2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdkl3Q8BLF2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdkl3Q8BLF2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdkl3Q8BLF2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cdkl3Q8BLF2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdkl3Q8BLF2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdkl3Q8BLF2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdkl3Q8BLF2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdkl3Q8BLF2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdkl3Q8BLF2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdkl3Q8BLF2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdkl3Q8BLF2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdkl3Q8BLF2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdkl3Q8BLF2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdkl3Q8BLF2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.5■□□□□ 0.71
Cdkl3Q8BLF2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdkl3Q8BLF2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdkl3Q8BLF2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdkl3Q8BLF2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdkl3Q8BLF2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.48■□□□□ 0.71
Cdkl3Q8BLF2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
Cdkl3Q8BLF2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdkl3Q8BLF2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cdkl3Q8BLF2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Cdkl3Q8BLF2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cdkl3Q8BLF2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdkl3Q8BLF2 Gm24804-201ENSMUST00000174982 85 ntBASIC19.47■□□□□ 0.71
Cdkl3Q8BLF2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdkl3Q8BLF2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cdkl3Q8BLF2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cdkl3Q8BLF2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cdkl3Q8BLF2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdkl3Q8BLF2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdkl3Q8BLF2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdkl3Q8BLF2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdkl3Q8BLF2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdkl3Q8BLF2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdkl3Q8BLF2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdkl3Q8BLF2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdkl3Q8BLF2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdkl3Q8BLF2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cdkl3Q8BLF2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cdkl3Q8BLF2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdkl3Q8BLF2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.44■□□□□ 0.7
Cdkl3Q8BLF2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Cdkl3Q8BLF2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkl3Q8BLF2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkl3Q8BLF2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkl3Q8BLF2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Cdkl3Q8BLF2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkl3Q8BLF2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cdkl3Q8BLF2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cdkl3Q8BLF2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkl3Q8BLF2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkl3Q8BLF2 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.43■□□□□ 0.7
Cdkl3Q8BLF2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cdkl3Q8BLF2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl3Q8BLF2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl3Q8BLF2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl3Q8BLF2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl3Q8BLF2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl3Q8BLF2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdkl3Q8BLF2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl3Q8BLF2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms