Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc5a7Q8BGY9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.98■□□□□ 0.79
Slc5a7Q8BGY9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc5a7Q8BGY9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Slc5a7Q8BGY9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Slc5a7Q8BGY9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc5a7Q8BGY9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc5a7Q8BGY9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc5a7Q8BGY9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Slc5a7Q8BGY9 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.97■□□□□ 0.79
Slc5a7Q8BGY9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.97■□□□□ 0.79
Slc5a7Q8BGY9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc5a7Q8BGY9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc5a7Q8BGY9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc5a7Q8BGY9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc5a7Q8BGY9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Slc5a7Q8BGY9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc5a7Q8BGY9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Slc5a7Q8BGY9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc5a7Q8BGY9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Slc5a7Q8BGY9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Slc5a7Q8BGY9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc5a7Q8BGY9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc5a7Q8BGY9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.95■□□□□ 0.78
Slc5a7Q8BGY9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc5a7Q8BGY9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Slc5a7Q8BGY9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc5a7Q8BGY9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc5a7Q8BGY9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Slc5a7Q8BGY9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slc5a7Q8BGY9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Slc5a7Q8BGY9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc5a7Q8BGY9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Slc5a7Q8BGY9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Slc5a7Q8BGY9 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.92■□□□□ 0.78
Slc5a7Q8BGY9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc5a7Q8BGY9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc5a7Q8BGY9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Slc5a7Q8BGY9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Slc5a7Q8BGY9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc5a7Q8BGY9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Slc5a7Q8BGY9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Slc5a7Q8BGY9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc5a7Q8BGY9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Slc5a7Q8BGY9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.91■□□□□ 0.78
Slc5a7Q8BGY9 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.91■□□□□ 0.78
Slc5a7Q8BGY9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc5a7Q8BGY9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc5a7Q8BGY9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc5a7Q8BGY9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Slc5a7Q8BGY9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Slc5a7Q8BGY9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Slc5a7Q8BGY9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc5a7Q8BGY9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Slc5a7Q8BGY9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc5a7Q8BGY9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc5a7Q8BGY9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Slc5a7Q8BGY9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc5a7Q8BGY9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc5a7Q8BGY9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Slc5a7Q8BGY9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Slc5a7Q8BGY9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc5a7Q8BGY9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc5a7Q8BGY9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Slc5a7Q8BGY9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc5a7Q8BGY9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Slc5a7Q8BGY9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc5a7Q8BGY9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Slc5a7Q8BGY9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Slc5a7Q8BGY9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc5a7Q8BGY9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Slc5a7Q8BGY9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc5a7Q8BGY9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc5a7Q8BGY9 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.85■□□□□ 0.77
Slc5a7Q8BGY9 Gm30023-201ENSMUST00000197970 889 ntBASIC19.85■□□□□ 0.77
Slc5a7Q8BGY9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Slc5a7Q8BGY9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.85■□□□□ 0.77
Slc5a7Q8BGY9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc5a7Q8BGY9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Slc5a7Q8BGY9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Slc5a7Q8BGY9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc5a7Q8BGY9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Slc5a7Q8BGY9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc5a7Q8BGY9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc5a7Q8BGY9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc5a7Q8BGY9 Gm24804-201ENSMUST00000174982 85 ntBASIC19.82■□□□□ 0.76
Slc5a7Q8BGY9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Slc5a7Q8BGY9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc5a7Q8BGY9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc5a7Q8BGY9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc5a7Q8BGY9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slc5a7Q8BGY9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.81■□□□□ 0.76
Slc5a7Q8BGY9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc5a7Q8BGY9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc5a7Q8BGY9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Slc5a7Q8BGY9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.8■□□□□ 0.76
Slc5a7Q8BGY9 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.8■□□□□ 0.76
Slc5a7Q8BGY9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc5a7Q8BGY9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.8■□□□□ 0.76
Slc5a7Q8BGY9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms