Protein–RNA interactions for Protein: Q8BGN5

Nipal3, NIPA-like protein 3, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipal3Q8BGN5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Nipal3Q8BGN5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nipal3Q8BGN5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nipal3Q8BGN5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nipal3Q8BGN5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.27■■□□□ 1
Nipal3Q8BGN5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nipal3Q8BGN5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Nipal3Q8BGN5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Nipal3Q8BGN5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nipal3Q8BGN5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nipal3Q8BGN5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nipal3Q8BGN5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Nipal3Q8BGN5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Nipal3Q8BGN5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nipal3Q8BGN5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nipal3Q8BGN5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nipal3Q8BGN5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Nipal3Q8BGN5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nipal3Q8BGN5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nipal3Q8BGN5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nipal3Q8BGN5 Gm6311-201ENSMUST00000073790 878 ntBASIC21.24■□□□□ 0.99
Nipal3Q8BGN5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nipal3Q8BGN5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nipal3Q8BGN5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nipal3Q8BGN5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nipal3Q8BGN5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nipal3Q8BGN5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Nipal3Q8BGN5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Nipal3Q8BGN5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nipal3Q8BGN5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nipal3Q8BGN5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Nipal3Q8BGN5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.22■□□□□ 0.99
Nipal3Q8BGN5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nipal3Q8BGN5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nipal3Q8BGN5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nipal3Q8BGN5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nipal3Q8BGN5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Nipal3Q8BGN5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nipal3Q8BGN5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nipal3Q8BGN5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nipal3Q8BGN5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nipal3Q8BGN5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.99
Nipal3Q8BGN5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.2■□□□□ 0.98
Nipal3Q8BGN5 Mir3960-201ENSMUST00000198213 73 ntBASIC21.2■□□□□ 0.98
Nipal3Q8BGN5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.2■□□□□ 0.98
Nipal3Q8BGN5 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.2■□□□□ 0.98
Nipal3Q8BGN5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
Nipal3Q8BGN5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nipal3Q8BGN5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nipal3Q8BGN5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nipal3Q8BGN5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nipal3Q8BGN5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nipal3Q8BGN5 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.19■□□□□ 0.98
Nipal3Q8BGN5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nipal3Q8BGN5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nipal3Q8BGN5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nipal3Q8BGN5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nipal3Q8BGN5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.18■□□□□ 0.98
Nipal3Q8BGN5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nipal3Q8BGN5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Nipal3Q8BGN5 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.17■□□□□ 0.98
Nipal3Q8BGN5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.17■□□□□ 0.98
Nipal3Q8BGN5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nipal3Q8BGN5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nipal3Q8BGN5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nipal3Q8BGN5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.16■□□□□ 0.98
Nipal3Q8BGN5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Nipal3Q8BGN5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Nipal3Q8BGN5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nipal3Q8BGN5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.15■□□□□ 0.98
Nipal3Q8BGN5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nipal3Q8BGN5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.15■□□□□ 0.98
Nipal3Q8BGN5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nipal3Q8BGN5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nipal3Q8BGN5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nipal3Q8BGN5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Nipal3Q8BGN5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nipal3Q8BGN5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.14■□□□□ 0.97
Nipal3Q8BGN5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nipal3Q8BGN5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.14■□□□□ 0.97
Nipal3Q8BGN5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nipal3Q8BGN5 Gm45364-201ENSMUST00000210883 159 ntBASIC21.13■□□□□ 0.97
Nipal3Q8BGN5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nipal3Q8BGN5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nipal3Q8BGN5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Nipal3Q8BGN5 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.12■□□□□ 0.97
Nipal3Q8BGN5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nipal3Q8BGN5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nipal3Q8BGN5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nipal3Q8BGN5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nipal3Q8BGN5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nipal3Q8BGN5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nipal3Q8BGN5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Nipal3Q8BGN5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nipal3Q8BGN5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nipal3Q8BGN5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nipal3Q8BGN5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Nipal3Q8BGN5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nipal3Q8BGN5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.09■□□□□ 0.97
Nipal3Q8BGN5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms