Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim50Q810I2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.1■■□□□ 1.13
Trim50Q810I2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.1■■□□□ 1.13
Trim50Q810I2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim50Q810I2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim50Q810I2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim50Q810I2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim50Q810I2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Trim50Q810I2 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.09■■□□□ 1.13
Trim50Q810I2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.09■■□□□ 1.13
Trim50Q810I2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim50Q810I2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim50Q810I2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim50Q810I2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Trim50Q810I2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim50Q810I2 Mir3960-201ENSMUST00000198213 73 ntBASIC22.08■■□□□ 1.13
Trim50Q810I2 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.08■■□□□ 1.13
Trim50Q810I2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Trim50Q810I2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim50Q810I2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim50Q810I2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.07■■□□□ 1.12
Trim50Q810I2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trim50Q810I2 Gm45364-201ENSMUST00000210883 159 ntBASIC22.05■■□□□ 1.12
Trim50Q810I2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim50Q810I2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim50Q810I2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim50Q810I2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim50Q810I2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.02■■□□□ 1.12
Trim50Q810I2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.02■■□□□ 1.12
Trim50Q810I2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Trim50Q810I2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim50Q810I2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim50Q810I2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim50Q810I2 Gm9812-201ENSMUST00000061934 968 ntBASIC22.01■■□□□ 1.11
Trim50Q810I2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim50Q810I2 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.01■■□□□ 1.11
Trim50Q810I2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.01■■□□□ 1.11
Trim50Q810I2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Trim50Q810I2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22■■□□□ 1.11
Trim50Q810I2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim50Q810I2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
Trim50Q810I2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim50Q810I2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Trim50Q810I2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim50Q810I2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim50Q810I2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.98■■□□□ 1.11
Trim50Q810I2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.98■■□□□ 1.11
Trim50Q810I2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Trim50Q810I2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim50Q810I2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim50Q810I2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim50Q810I2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim50Q810I2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.96■■□□□ 1.11
Trim50Q810I2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim50Q810I2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim50Q810I2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim50Q810I2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Trim50Q810I2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Trim50Q810I2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim50Q810I2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim50Q810I2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim50Q810I2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim50Q810I2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim50Q810I2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim50Q810I2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim50Q810I2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.94■■□□□ 1.1
Trim50Q810I2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.94■■□□□ 1.1
Trim50Q810I2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim50Q810I2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim50Q810I2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim50Q810I2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim50Q810I2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.93■■□□□ 1.1
Trim50Q810I2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Trim50Q810I2 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.93■■□□□ 1.1
Trim50Q810I2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Trim50Q810I2 Gm6311-201ENSMUST00000073790 878 ntBASIC21.93■■□□□ 1.1
Trim50Q810I2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim50Q810I2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Trim50Q810I2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Trim50Q810I2 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.91■■□□□ 1.1
Trim50Q810I2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim50Q810I2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim50Q810I2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim50Q810I2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trim50Q810I2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Trim50Q810I2 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.9■■□□□ 1.1
Trim50Q810I2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Trim50Q810I2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim50Q810I2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.89■■□□□ 1.09
Trim50Q810I2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim50Q810I2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
Trim50Q810I2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trim50Q810I2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim50Q810I2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim50Q810I2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.87■■□□□ 1.09
Trim50Q810I2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim50Q810I2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Trim50Q810I2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.86■■□□□ 1.09
Trim50Q810I2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim50Q810I2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms