Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Rnf20Q5DTM8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rnf20Q5DTM8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Rnf20Q5DTM8 Gm42699-201ENSMUST00000198104 1657 ntBASIC27.04■■□□□ 1.92
Rnf20Q5DTM8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.03■■□□□ 1.92
Rnf20Q5DTM8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rnf20Q5DTM8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rnf20Q5DTM8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rnf20Q5DTM8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rnf20Q5DTM8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rnf20Q5DTM8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC27.02■■□□□ 1.92
Rnf20Q5DTM8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rnf20Q5DTM8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Rnf20Q5DTM8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Rnf20Q5DTM8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Rnf20Q5DTM8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Rnf20Q5DTM8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Rnf20Q5DTM8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
Rnf20Q5DTM8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Rnf20Q5DTM8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rnf20Q5DTM8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Rnf20Q5DTM8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rnf20Q5DTM8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rnf20Q5DTM8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rnf20Q5DTM8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rnf20Q5DTM8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Rnf20Q5DTM8 Mir3960-201ENSMUST00000198213 73 ntBASIC26.96■■□□□ 1.91
Rnf20Q5DTM8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
Rnf20Q5DTM8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rnf20Q5DTM8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
Rnf20Q5DTM8 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.95■■□□□ 1.9
Rnf20Q5DTM8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Rnf20Q5DTM8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC26.94■■□□□ 1.9
Rnf20Q5DTM8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rnf20Q5DTM8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rnf20Q5DTM8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rnf20Q5DTM8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rnf20Q5DTM8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rnf20Q5DTM8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rnf20Q5DTM8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Rnf20Q5DTM8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rnf20Q5DTM8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Rnf20Q5DTM8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rnf20Q5DTM8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rnf20Q5DTM8 Gm9812-201ENSMUST00000061934 968 ntBASIC26.92■■□□□ 1.9
Rnf20Q5DTM8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rnf20Q5DTM8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Rnf20Q5DTM8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Rnf20Q5DTM8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Rnf20Q5DTM8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Rnf20Q5DTM8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Rnf20Q5DTM8 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.91■■□□□ 1.9
Rnf20Q5DTM8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Rnf20Q5DTM8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rnf20Q5DTM8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rnf20Q5DTM8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Rnf20Q5DTM8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Rnf20Q5DTM8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rnf20Q5DTM8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.89■■□□□ 1.9
Rnf20Q5DTM8 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.89■■□□□ 1.89
Rnf20Q5DTM8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
Rnf20Q5DTM8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Rnf20Q5DTM8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.88■■□□□ 1.89
Rnf20Q5DTM8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Rnf20Q5DTM8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rnf20Q5DTM8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rnf20Q5DTM8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Rnf20Q5DTM8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rnf20Q5DTM8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.87■■□□□ 1.89
Rnf20Q5DTM8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rnf20Q5DTM8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
Rnf20Q5DTM8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.86■■□□□ 1.89
Rnf20Q5DTM8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.86■■□□□ 1.89
Rnf20Q5DTM8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rnf20Q5DTM8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.86■■□□□ 1.89
Rnf20Q5DTM8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rnf20Q5DTM8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Rnf20Q5DTM8 Gm45364-201ENSMUST00000210883 159 ntBASIC26.85■■□□□ 1.89
Rnf20Q5DTM8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rnf20Q5DTM8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Rnf20Q5DTM8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rnf20Q5DTM8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Rnf20Q5DTM8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.85■■□□□ 1.89
Rnf20Q5DTM8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rnf20Q5DTM8 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.84■■□□□ 1.89
Rnf20Q5DTM8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.84■■□□□ 1.89
Rnf20Q5DTM8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
Rnf20Q5DTM8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.83■■□□□ 1.89
Rnf20Q5DTM8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Rnf20Q5DTM8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.82■■□□□ 1.88
Rnf20Q5DTM8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.82■■□□□ 1.88
Rnf20Q5DTM8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rnf20Q5DTM8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rnf20Q5DTM8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
Rnf20Q5DTM8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC26.8■■□□□ 1.88
Rnf20Q5DTM8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Rnf20Q5DTM8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rnf20Q5DTM8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rnf20Q5DTM8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Rnf20Q5DTM8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms