Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx49Q4FZF3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.71■■□□□ 1.87
Ddx49Q4FZF3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Ddx49Q4FZF3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ddx49Q4FZF3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.7■■□□□ 1.86
Ddx49Q4FZF3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Ddx49Q4FZF3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ddx49Q4FZF3 Gm14121-201ENSMUST00000121441 1380 ntBASIC26.7■■□□□ 1.86
Ddx49Q4FZF3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx49Q4FZF3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.69■■□□□ 1.86
Ddx49Q4FZF3 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.69■■□□□ 1.86
Ddx49Q4FZF3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC26.68■■□□□ 1.86
Ddx49Q4FZF3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx49Q4FZF3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.67■■□□□ 1.86
Ddx49Q4FZF3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Ddx49Q4FZF3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx49Q4FZF3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx49Q4FZF3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx49Q4FZF3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Ddx49Q4FZF3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Ddx49Q4FZF3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ddx49Q4FZF3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.63■■□□□ 1.85
Ddx49Q4FZF3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Ddx49Q4FZF3 Gm44428-201ENSMUST00000204474 874 ntBASIC26.63■■□□□ 1.85
Ddx49Q4FZF3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.62■■□□□ 1.85
Ddx49Q4FZF3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ddx49Q4FZF3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.62■■□□□ 1.85
Ddx49Q4FZF3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ddx49Q4FZF3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.61■■□□□ 1.85
Ddx49Q4FZF3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ddx49Q4FZF3 Gm13238-201ENSMUST00000117655 780 ntBASIC26.6■■□□□ 1.85
Ddx49Q4FZF3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Ddx49Q4FZF3 Gm15820-201ENSMUST00000201566 728 ntBASIC26.6■■□□□ 1.85
Ddx49Q4FZF3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Ddx49Q4FZF3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ddx49Q4FZF3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
Ddx49Q4FZF3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Ddx49Q4FZF3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx49Q4FZF3 Gm37847-201ENSMUST00000192163 1497 ntBASIC26.59■■□□□ 1.85
Ddx49Q4FZF3 Gm31748-201ENSMUST00000194938 1497 ntBASIC26.59■■□□□ 1.85
Ddx49Q4FZF3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx49Q4FZF3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx49Q4FZF3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx49Q4FZF3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx49Q4FZF3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx49Q4FZF3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
Ddx49Q4FZF3 Rps24-207ENSMUST00000224568 714 ntBASIC26.57■■□□□ 1.84
Ddx49Q4FZF3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx49Q4FZF3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx49Q4FZF3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
Ddx49Q4FZF3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.54■■□□□ 1.84
Ddx49Q4FZF3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ddx49Q4FZF3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx49Q4FZF3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx49Q4FZF3 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.53■■□□□ 1.84
Ddx49Q4FZF3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx49Q4FZF3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.52■■□□□ 1.84
Ddx49Q4FZF3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.52■■□□□ 1.84
Ddx49Q4FZF3 Gm43566-201ENSMUST00000196851 808 ntBASIC26.52■■□□□ 1.84
Ddx49Q4FZF3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx49Q4FZF3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx49Q4FZF3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.52■■□□□ 1.84
Ddx49Q4FZF3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Ddx49Q4FZF3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx49Q4FZF3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx49Q4FZF3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.51■■□□□ 1.83
Ddx49Q4FZF3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
Ddx49Q4FZF3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx49Q4FZF3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx49Q4FZF3 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.5■■□□□ 1.83
Ddx49Q4FZF3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ddx49Q4FZF3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ddx49Q4FZF3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Ddx49Q4FZF3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx49Q4FZF3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx49Q4FZF3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Ddx49Q4FZF3 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.48■■□□□ 1.83
Ddx49Q4FZF3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ddx49Q4FZF3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Ddx49Q4FZF3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx49Q4FZF3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx49Q4FZF3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx49Q4FZF3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx49Q4FZF3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ddx49Q4FZF3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.46■■□□□ 1.83
Ddx49Q4FZF3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ddx49Q4FZF3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Ddx49Q4FZF3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
Ddx49Q4FZF3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.45■■□□□ 1.82
Ddx49Q4FZF3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Ddx49Q4FZF3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.45■■□□□ 1.82
Ddx49Q4FZF3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Ddx49Q4FZF3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.45■■□□□ 1.82
Ddx49Q4FZF3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ddx49Q4FZF3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
Ddx49Q4FZF3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.44■■□□□ 1.82
Ddx49Q4FZF3 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.44■■□□□ 1.82
Ddx49Q4FZF3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ddx49Q4FZF3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.43■■□□□ 1.82
Ddx49Q4FZF3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms