Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lsmem1Q3UQS2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lsmem1Q3UQS2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lsmem1Q3UQS2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lsmem1Q3UQS2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Lsmem1Q3UQS2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lsmem1Q3UQS2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.22■■□□□ 1.31
Lsmem1Q3UQS2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Lsmem1Q3UQS2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Lsmem1Q3UQS2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.22■■□□□ 1.31
Lsmem1Q3UQS2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Lsmem1Q3UQS2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Lsmem1Q3UQS2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Lsmem1Q3UQS2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Lsmem1Q3UQS2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Lsmem1Q3UQS2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Lsmem1Q3UQS2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Lsmem1Q3UQS2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.19■■□□□ 1.3
Lsmem1Q3UQS2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Lsmem1Q3UQS2 Terc-201ENSMUST00000082862 423 ntBASIC23.19■■□□□ 1.3
Lsmem1Q3UQS2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lsmem1Q3UQS2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Lsmem1Q3UQS2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.18■■□□□ 1.3
Lsmem1Q3UQS2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lsmem1Q3UQS2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lsmem1Q3UQS2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Lsmem1Q3UQS2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Lsmem1Q3UQS2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Lsmem1Q3UQS2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Lsmem1Q3UQS2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Lsmem1Q3UQS2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Lsmem1Q3UQS2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.15■■□□□ 1.3
Lsmem1Q3UQS2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Lsmem1Q3UQS2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.14■■□□□ 1.3
Lsmem1Q3UQS2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Lsmem1Q3UQS2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Lsmem1Q3UQS2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
Lsmem1Q3UQS2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lsmem1Q3UQS2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Lsmem1Q3UQS2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Lsmem1Q3UQS2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.12■■□□□ 1.29
Lsmem1Q3UQS2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Lsmem1Q3UQS2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Lsmem1Q3UQS2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Lsmem1Q3UQS2 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.12■■□□□ 1.29
Lsmem1Q3UQS2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Lsmem1Q3UQS2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Lsmem1Q3UQS2 Scarna2-201ENSMUST00000157560 414 ntBASIC23.11■■□□□ 1.29
Lsmem1Q3UQS2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Lsmem1Q3UQS2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Lsmem1Q3UQS2 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.1■■□□□ 1.29
Lsmem1Q3UQS2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Lsmem1Q3UQS2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Lsmem1Q3UQS2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Lsmem1Q3UQS2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Lsmem1Q3UQS2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Lsmem1Q3UQS2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.09■■□□□ 1.29
Lsmem1Q3UQS2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Lsmem1Q3UQS2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Lsmem1Q3UQS2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Lsmem1Q3UQS2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Lsmem1Q3UQS2 Gm9806-201ENSMUST00000051080 552 ntBASIC23.08■■□□□ 1.29
Lsmem1Q3UQS2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Lsmem1Q3UQS2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Lsmem1Q3UQS2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Lsmem1Q3UQS2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Lsmem1Q3UQS2 Gm11175-201ENSMUST00000116172 543 ntBASIC23.07■■□□□ 1.28
Lsmem1Q3UQS2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Lsmem1Q3UQS2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Lsmem1Q3UQS2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Lsmem1Q3UQS2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
Lsmem1Q3UQS2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Lsmem1Q3UQS2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Lsmem1Q3UQS2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Lsmem1Q3UQS2 Gm16437-201ENSMUST00000025669 507 ntBASIC23.05■■□□□ 1.28
Lsmem1Q3UQS2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lsmem1Q3UQS2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Lsmem1Q3UQS2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lsmem1Q3UQS2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
Lsmem1Q3UQS2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Lsmem1Q3UQS2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lsmem1Q3UQS2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lsmem1Q3UQS2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lsmem1Q3UQS2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Lsmem1Q3UQS2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.03■■□□□ 1.28
Lsmem1Q3UQS2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lsmem1Q3UQS2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Lsmem1Q3UQS2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lsmem1Q3UQS2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lsmem1Q3UQS2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lsmem1Q3UQS2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Lsmem1Q3UQS2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Lsmem1Q3UQS2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Lsmem1Q3UQS2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lsmem1Q3UQS2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lsmem1Q3UQS2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Lsmem1Q3UQS2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Lsmem1Q3UQS2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.01■■□□□ 1.27
Lsmem1Q3UQS2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Lsmem1Q3UQS2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms