Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Uspl1Q3ULM6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Uspl1Q3ULM6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Uspl1Q3ULM6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Uspl1Q3ULM6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Uspl1Q3ULM6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Uspl1Q3ULM6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Uspl1Q3ULM6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Uspl1Q3ULM6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC29.78■■■□□ 2.36
Uspl1Q3ULM6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Uspl1Q3ULM6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
Uspl1Q3ULM6 AC153911.1-201ENSMUST00000220378 758 ntBASIC29.77■■■□□ 2.36
Uspl1Q3ULM6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Uspl1Q3ULM6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Uspl1Q3ULM6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Uspl1Q3ULM6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Uspl1Q3ULM6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Uspl1Q3ULM6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC29.76■■■□□ 2.35
Uspl1Q3ULM6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC29.76■■■□□ 2.35
Uspl1Q3ULM6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Uspl1Q3ULM6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Uspl1Q3ULM6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Uspl1Q3ULM6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Uspl1Q3ULM6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Uspl1Q3ULM6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Uspl1Q3ULM6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC29.71■■■□□ 2.35
Uspl1Q3ULM6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
Uspl1Q3ULM6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC29.7■■■□□ 2.35
Uspl1Q3ULM6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC29.7■■■□□ 2.34
Uspl1Q3ULM6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29.69■■■□□ 2.34
Uspl1Q3ULM6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Uspl1Q3ULM6 Terc-201ENSMUST00000082862 423 ntBASIC29.69■■■□□ 2.34
Uspl1Q3ULM6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Uspl1Q3ULM6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC29.68■■■□□ 2.34
Uspl1Q3ULM6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Uspl1Q3ULM6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
Uspl1Q3ULM6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Uspl1Q3ULM6 Gm42699-201ENSMUST00000198104 1657 ntBASIC29.68■■■□□ 2.34
Uspl1Q3ULM6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Uspl1Q3ULM6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
Uspl1Q3ULM6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Uspl1Q3ULM6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC29.66■■■□□ 2.34
Uspl1Q3ULM6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Uspl1Q3ULM6 Gm11175-201ENSMUST00000116172 543 ntBASIC29.66■■■□□ 2.34
Uspl1Q3ULM6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
Uspl1Q3ULM6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
Uspl1Q3ULM6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Uspl1Q3ULM6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Uspl1Q3ULM6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
Uspl1Q3ULM6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Uspl1Q3ULM6 Gm9910-201ENSMUST00000195385 1550 ntBASIC29.62■■■□□ 2.33
Uspl1Q3ULM6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Uspl1Q3ULM6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Uspl1Q3ULM6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Uspl1Q3ULM6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Uspl1Q3ULM6 Scarna2-201ENSMUST00000157560 414 ntBASIC29.61■■■□□ 2.33
Uspl1Q3ULM6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Uspl1Q3ULM6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
Uspl1Q3ULM6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Uspl1Q3ULM6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC29.6■■■□□ 2.33
Uspl1Q3ULM6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Uspl1Q3ULM6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Uspl1Q3ULM6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Uspl1Q3ULM6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Uspl1Q3ULM6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Uspl1Q3ULM6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Uspl1Q3ULM6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Uspl1Q3ULM6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
Uspl1Q3ULM6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Uspl1Q3ULM6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC29.57■■■□□ 2.32
Uspl1Q3ULM6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Uspl1Q3ULM6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Uspl1Q3ULM6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Uspl1Q3ULM6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Uspl1Q3ULM6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Uspl1Q3ULM6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Uspl1Q3ULM6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Uspl1Q3ULM6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Uspl1Q3ULM6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
Uspl1Q3ULM6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Uspl1Q3ULM6 Gm9806-201ENSMUST00000051080 552 ntBASIC29.55■■■□□ 2.32
Uspl1Q3ULM6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Uspl1Q3ULM6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Uspl1Q3ULM6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Uspl1Q3ULM6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
Uspl1Q3ULM6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC29.54■■■□□ 2.32
Uspl1Q3ULM6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Uspl1Q3ULM6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
Uspl1Q3ULM6 Gm16437-201ENSMUST00000025669 507 ntBASIC29.53■■■□□ 2.32
Uspl1Q3ULM6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Uspl1Q3ULM6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
Uspl1Q3ULM6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Uspl1Q3ULM6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Uspl1Q3ULM6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Uspl1Q3ULM6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Uspl1Q3ULM6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Uspl1Q3ULM6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Uspl1Q3ULM6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC29.52■■■□□ 2.32
Uspl1Q3ULM6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Uspl1Q3ULM6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms