Protein–RNA interactions for Protein: Q2MH31

Smrp1, Spermatid-specific manchette-related protein 1, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smrp1Q2MH31 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smrp1Q2MH31 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smrp1Q2MH31 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.96■□□□□ 0.47
Smrp1Q2MH31 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smrp1Q2MH31 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smrp1Q2MH31 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smrp1Q2MH31 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smrp1Q2MH31 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smrp1Q2MH31 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smrp1Q2MH31 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smrp1Q2MH31 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.94■□□□□ 0.46
Smrp1Q2MH31 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smrp1Q2MH31 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smrp1Q2MH31 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.93■□□□□ 0.46
Smrp1Q2MH31 Gm44428-201ENSMUST00000204474 874 ntBASIC17.93■□□□□ 0.46
Smrp1Q2MH31 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smrp1Q2MH31 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smrp1Q2MH31 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smrp1Q2MH31 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smrp1Q2MH31 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smrp1Q2MH31 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smrp1Q2MH31 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smrp1Q2MH31 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smrp1Q2MH31 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.9■□□□□ 0.46
Smrp1Q2MH31 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smrp1Q2MH31 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smrp1Q2MH31 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smrp1Q2MH31 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smrp1Q2MH31 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.9■□□□□ 0.46
Smrp1Q2MH31 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smrp1Q2MH31 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smrp1Q2MH31 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smrp1Q2MH31 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.89■□□□□ 0.45
Smrp1Q2MH31 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.89■□□□□ 0.45
Smrp1Q2MH31 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smrp1Q2MH31 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smrp1Q2MH31 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smrp1Q2MH31 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Smrp1Q2MH31 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.89■□□□□ 0.45
Smrp1Q2MH31 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smrp1Q2MH31 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smrp1Q2MH31 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.88■□□□□ 0.45
Smrp1Q2MH31 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.88■□□□□ 0.45
Smrp1Q2MH31 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Smrp1Q2MH31 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smrp1Q2MH31 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Smrp1Q2MH31 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Smrp1Q2MH31 Gm13238-201ENSMUST00000117655 780 ntBASIC17.87■□□□□ 0.45
Smrp1Q2MH31 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.87■□□□□ 0.45
Smrp1Q2MH31 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Smrp1Q2MH31 Gm43566-201ENSMUST00000196851 808 ntBASIC17.87■□□□□ 0.45
Smrp1Q2MH31 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smrp1Q2MH31 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.87■□□□□ 0.45
Smrp1Q2MH31 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smrp1Q2MH31 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Smrp1Q2MH31 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smrp1Q2MH31 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smrp1Q2MH31 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Smrp1Q2MH31 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smrp1Q2MH31 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smrp1Q2MH31 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smrp1Q2MH31 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.85■□□□□ 0.45
Smrp1Q2MH31 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.85■□□□□ 0.45
Smrp1Q2MH31 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smrp1Q2MH31 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smrp1Q2MH31 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smrp1Q2MH31 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smrp1Q2MH31 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.83■□□□□ 0.45
Smrp1Q2MH31 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.83■□□□□ 0.45
Smrp1Q2MH31 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.83■□□□□ 0.44
Smrp1Q2MH31 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Smrp1Q2MH31 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Smrp1Q2MH31 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smrp1Q2MH31 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Smrp1Q2MH31 Gm14117-201ENSMUST00000122417 843 ntBASIC17.83■□□□□ 0.44
Smrp1Q2MH31 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.83■□□□□ 0.44
Smrp1Q2MH31 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.83■□□□□ 0.44
Smrp1Q2MH31 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Smrp1Q2MH31 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smrp1Q2MH31 Gm45102-201ENSMUST00000207427 857 ntBASIC17.82■□□□□ 0.44
Smrp1Q2MH31 Gm45444-201ENSMUST00000211394 898 ntBASIC17.82■□□□□ 0.44
Smrp1Q2MH31 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smrp1Q2MH31 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smrp1Q2MH31 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smrp1Q2MH31 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smrp1Q2MH31 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.81■□□□□ 0.44
Smrp1Q2MH31 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Smrp1Q2MH31 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smrp1Q2MH31 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smrp1Q2MH31 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smrp1Q2MH31 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Smrp1Q2MH31 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smrp1Q2MH31 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smrp1Q2MH31 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smrp1Q2MH31 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smrp1Q2MH31 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Smrp1Q2MH31 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.78■□□□□ 0.44
Smrp1Q2MH31 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smrp1Q2MH31 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Smrp1Q2MH31 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms