Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.92■□□□□ 0.94
Col10a1Q05306 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Col10a1Q05306 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col10a1Q05306 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col10a1Q05306 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.91■□□□□ 0.94
Col10a1Q05306 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col10a1Q05306 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col10a1Q05306 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col10a1Q05306 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col10a1Q05306 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.9■□□□□ 0.94
Col10a1Q05306 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Col10a1Q05306 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col10a1Q05306 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col10a1Q05306 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col10a1Q05306 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.89■□□□□ 0.93
Col10a1Q05306 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.89■□□□□ 0.93
Col10a1Q05306 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col10a1Q05306 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col10a1Q05306 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col10a1Q05306 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col10a1Q05306 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col10a1Q05306 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col10a1Q05306 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col10a1Q05306 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.87■□□□□ 0.93
Col10a1Q05306 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Col10a1Q05306 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col10a1Q05306 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col10a1Q05306 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Col10a1Q05306 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col10a1Q05306 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col10a1Q05306 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col10a1Q05306 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Col10a1Q05306 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col10a1Q05306 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col10a1Q05306 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col10a1Q05306 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col10a1Q05306 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col10a1Q05306 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col10a1Q05306 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col10a1Q05306 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.83■□□□□ 0.93
Col10a1Q05306 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.83■□□□□ 0.93
Col10a1Q05306 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col10a1Q05306 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col10a1Q05306 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col10a1Q05306 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.82■□□□□ 0.92
Col10a1Q05306 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.82■□□□□ 0.92
Col10a1Q05306 Scarna2-201ENSMUST00000157560 414 ntBASIC20.82■□□□□ 0.92
Col10a1Q05306 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.82■□□□□ 0.92
Col10a1Q05306 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col10a1Q05306 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col10a1Q05306 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col10a1Q05306 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col10a1Q05306 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col10a1Q05306 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col10a1Q05306 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.81■□□□□ 0.92
Col10a1Q05306 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col10a1Q05306 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col10a1Q05306 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col10a1Q05306 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col10a1Q05306 Terc-201ENSMUST00000082862 423 ntBASIC20.8■□□□□ 0.92
Col10a1Q05306 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col10a1Q05306 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col10a1Q05306 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Col10a1Q05306 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col10a1Q05306 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col10a1Q05306 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col10a1Q05306 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col10a1Q05306 Gm9806-201ENSMUST00000051080 552 ntBASIC20.78■□□□□ 0.92
Col10a1Q05306 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col10a1Q05306 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.77■□□□□ 0.92
Col10a1Q05306 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Col10a1Q05306 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col10a1Q05306 Gm16437-201ENSMUST00000025669 507 ntBASIC20.77■□□□□ 0.92
Col10a1Q05306 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.77■□□□□ 0.92
Col10a1Q05306 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col10a1Q05306 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col10a1Q05306 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col10a1Q05306 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col10a1Q05306 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col10a1Q05306 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col10a1Q05306 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col10a1Q05306 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col10a1Q05306 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col10a1Q05306 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col10a1Q05306 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
Col10a1Q05306 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col10a1Q05306 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col10a1Q05306 Gm11175-201ENSMUST00000116172 543 ntBASIC20.74■□□□□ 0.91
Col10a1Q05306 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col10a1Q05306 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.74■□□□□ 0.91
Col10a1Q05306 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col10a1Q05306 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Col10a1Q05306 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col10a1Q05306 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col10a1Q05306 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col10a1Q05306 Gm11687-201ENSMUST00000118911 886 ntBASIC20.72■□□□□ 0.91
Col10a1Q05306 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col10a1Q05306 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col10a1Q05306 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col10a1Q05306 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms