Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SgcaP82350 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.62
SgcaP82350 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SgcaP82350 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SgcaP82350 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SgcaP82350 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SgcaP82350 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.94■□□□□ 0.62
SgcaP82350 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SgcaP82350 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SgcaP82350 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SgcaP82350 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.93■□□□□ 0.62
SgcaP82350 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.93■□□□□ 0.62
SgcaP82350 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SgcaP82350 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SgcaP82350 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SgcaP82350 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SgcaP82350 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SgcaP82350 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SgcaP82350 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SgcaP82350 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SgcaP82350 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SgcaP82350 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SgcaP82350 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SgcaP82350 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SgcaP82350 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SgcaP82350 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
SgcaP82350 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SgcaP82350 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SgcaP82350 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SgcaP82350 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SgcaP82350 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SgcaP82350 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SgcaP82350 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SgcaP82350 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SgcaP82350 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.89■□□□□ 0.61
SgcaP82350 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SgcaP82350 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SgcaP82350 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SgcaP82350 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SgcaP82350 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SgcaP82350 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SgcaP82350 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SgcaP82350 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SgcaP82350 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SgcaP82350 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SgcaP82350 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SgcaP82350 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SgcaP82350 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SgcaP82350 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SgcaP82350 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SgcaP82350 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SgcaP82350 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.87■□□□□ 0.61
SgcaP82350 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SgcaP82350 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SgcaP82350 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SgcaP82350 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SgcaP82350 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.86■□□□□ 0.61
SgcaP82350 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SgcaP82350 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SgcaP82350 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SgcaP82350 Particl-201ENSMUST00000205370 1560 ntBASIC18.85■□□□□ 0.61
SgcaP82350 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SgcaP82350 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SgcaP82350 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SgcaP82350 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SgcaP82350 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SgcaP82350 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SgcaP82350 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SgcaP82350 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SgcaP82350 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SgcaP82350 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SgcaP82350 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SgcaP82350 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SgcaP82350 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SgcaP82350 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SgcaP82350 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.83■□□□□ 0.6
SgcaP82350 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SgcaP82350 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.83■□□□□ 0.6
SgcaP82350 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.83■□□□□ 0.6
SgcaP82350 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SgcaP82350 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SgcaP82350 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SgcaP82350 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SgcaP82350 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SgcaP82350 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SgcaP82350 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SgcaP82350 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SgcaP82350 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcaP82350 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcaP82350 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcaP82350 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcaP82350 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.81■□□□□ 0.6
SgcaP82350 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcaP82350 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SgcaP82350 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SgcaP82350 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SgcaP82350 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SgcaP82350 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SgcaP82350 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SgcaP82350 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms