Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GdnfP48540 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
GdnfP48540 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.78■□□□□ 0.76
GdnfP48540 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
GdnfP48540 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GdnfP48540 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.77■□□□□ 0.76
GdnfP48540 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
GdnfP48540 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GdnfP48540 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GdnfP48540 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.76■□□□□ 0.75
GdnfP48540 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.76■□□□□ 0.75
GdnfP48540 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GdnfP48540 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
GdnfP48540 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
GdnfP48540 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GdnfP48540 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
GdnfP48540 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
GdnfP48540 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
GdnfP48540 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GdnfP48540 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GdnfP48540 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GdnfP48540 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GdnfP48540 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GdnfP48540 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GdnfP48540 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.73■□□□□ 0.75
GdnfP48540 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
GdnfP48540 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
GdnfP48540 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GdnfP48540 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GdnfP48540 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
GdnfP48540 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GdnfP48540 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
GdnfP48540 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GdnfP48540 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GdnfP48540 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GdnfP48540 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GdnfP48540 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GdnfP48540 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GdnfP48540 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GdnfP48540 Gm6821-201ENSMUST00000107540 542 ntBASIC19.72■□□□□ 0.75
GdnfP48540 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GdnfP48540 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GdnfP48540 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
GdnfP48540 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GdnfP48540 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.72■□□□□ 0.75
GdnfP48540 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GdnfP48540 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GdnfP48540 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GdnfP48540 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GdnfP48540 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GdnfP48540 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GdnfP48540 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GdnfP48540 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GdnfP48540 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
GdnfP48540 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
GdnfP48540 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GdnfP48540 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.69■□□□□ 0.74
GdnfP48540 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
GdnfP48540 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GdnfP48540 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GdnfP48540 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
GdnfP48540 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
GdnfP48540 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GdnfP48540 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GdnfP48540 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GdnfP48540 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GdnfP48540 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GdnfP48540 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.67■□□□□ 0.74
GdnfP48540 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GdnfP48540 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GdnfP48540 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GdnfP48540 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GdnfP48540 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
GdnfP48540 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
GdnfP48540 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.65■□□□□ 0.74
GdnfP48540 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GdnfP48540 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
GdnfP48540 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
GdnfP48540 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.64■□□□□ 0.73
GdnfP48540 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.64■□□□□ 0.73
GdnfP48540 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.64■□□□□ 0.73
GdnfP48540 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GdnfP48540 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GdnfP48540 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GdnfP48540 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.63■□□□□ 0.73
GdnfP48540 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.62■□□□□ 0.73
GdnfP48540 Gm8503-201ENSMUST00000118131 455 ntBASIC19.62■□□□□ 0.73
GdnfP48540 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GdnfP48540 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
GdnfP48540 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GdnfP48540 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GdnfP48540 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.61■□□□□ 0.73
GdnfP48540 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GdnfP48540 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GdnfP48540 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GdnfP48540 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
GdnfP48540 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
GdnfP48540 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
GdnfP48540 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GdnfP48540 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms