Protein–RNA interactions for Protein: P47741

Tnfrsf4, Tumor necrosis factor receptor superfamily member 4, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf4P47741 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Tnfrsf4P47741 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.36■■□□□ 1.33
Tnfrsf4P47741 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.36■■□□□ 1.33
Tnfrsf4P47741 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Tnfrsf4P47741 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Tnfrsf4P47741 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.35■■□□□ 1.33
Tnfrsf4P47741 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.35■■□□□ 1.33
Tnfrsf4P47741 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Tnfrsf4P47741 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Tnfrsf4P47741 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tnfrsf4P47741 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
Tnfrsf4P47741 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Tnfrsf4P47741 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Tnfrsf4P47741 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Tnfrsf4P47741 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.33■■□□□ 1.32
Tnfrsf4P47741 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Tnfrsf4P47741 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Tnfrsf4P47741 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Tnfrsf4P47741 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
Tnfrsf4P47741 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Tnfrsf4P47741 Gm15039-201ENSMUST00000118914 875 ntBASIC23.31■■□□□ 1.32
Tnfrsf4P47741 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Tnfrsf4P47741 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Tnfrsf4P47741 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf4P47741 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.3■■□□□ 1.32
Tnfrsf4P47741 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.3■■□□□ 1.32
Tnfrsf4P47741 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf4P47741 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Tnfrsf4P47741 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tnfrsf4P47741 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tnfrsf4P47741 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Tnfrsf4P47741 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tnfrsf4P47741 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Tnfrsf4P47741 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Tnfrsf4P47741 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Tnfrsf4P47741 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Tnfrsf4P47741 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Tnfrsf4P47741 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.27■■□□□ 1.32
Tnfrsf4P47741 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Tnfrsf4P47741 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.26■■□□□ 1.31
Tnfrsf4P47741 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.26■■□□□ 1.31
Tnfrsf4P47741 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
Tnfrsf4P47741 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.25■■□□□ 1.31
Tnfrsf4P47741 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.25■■□□□ 1.31
Tnfrsf4P47741 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.25■■□□□ 1.31
Tnfrsf4P47741 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Tnfrsf4P47741 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.24■■□□□ 1.31
Tnfrsf4P47741 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Tnfrsf4P47741 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
Tnfrsf4P47741 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Tnfrsf4P47741 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Tnfrsf4P47741 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.24■■□□□ 1.31
Tnfrsf4P47741 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.24■■□□□ 1.31
Tnfrsf4P47741 Gm43566-201ENSMUST00000196851 808 ntBASIC23.24■■□□□ 1.31
Tnfrsf4P47741 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.24■■□□□ 1.31
Tnfrsf4P47741 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Tnfrsf4P47741 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Tnfrsf4P47741 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.24■■□□□ 1.31
Tnfrsf4P47741 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tnfrsf4P47741 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tnfrsf4P47741 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tnfrsf4P47741 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Tnfrsf4P47741 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tnfrsf4P47741 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tnfrsf4P47741 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.22■■□□□ 1.31
Tnfrsf4P47741 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tnfrsf4P47741 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tnfrsf4P47741 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.21■■□□□ 1.31
Tnfrsf4P47741 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tnfrsf4P47741 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.2■■□□□ 1.3
Tnfrsf4P47741 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Tnfrsf4P47741 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tnfrsf4P47741 Gm13238-201ENSMUST00000117655 780 ntBASIC23.19■■□□□ 1.3
Tnfrsf4P47741 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Tnfrsf4P47741 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tnfrsf4P47741 Gm45444-201ENSMUST00000211394 898 ntBASIC23.18■■□□□ 1.3
Tnfrsf4P47741 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.18■■□□□ 1.3
Tnfrsf4P47741 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Tnfrsf4P47741 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tnfrsf4P47741 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Tnfrsf4P47741 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.17■■□□□ 1.3
Tnfrsf4P47741 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tnfrsf4P47741 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tnfrsf4P47741 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tnfrsf4P47741 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Tnfrsf4P47741 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tnfrsf4P47741 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.16■■□□□ 1.3
Tnfrsf4P47741 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.16■■□□□ 1.3
Tnfrsf4P47741 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tnfrsf4P47741 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.15■■□□□ 1.3
Tnfrsf4P47741 Gm15820-201ENSMUST00000201566 728 ntBASIC23.15■■□□□ 1.3
Tnfrsf4P47741 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tnfrsf4P47741 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Tnfrsf4P47741 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.15■■□□□ 1.3
Tnfrsf4P47741 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.14■■□□□ 1.29
Tnfrsf4P47741 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tnfrsf4P47741 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tnfrsf4P47741 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tnfrsf4P47741 Rps24-207ENSMUST00000224568 714 ntBASIC23.13■■□□□ 1.29
Tnfrsf4P47741 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms