Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a1P31648 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.51■□□□□ 0.71
Slc6a1P31648 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
Slc6a1P31648 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a1P31648 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc6a1P31648 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a1P31648 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc6a1P31648 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a1P31648 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a1P31648 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a1P31648 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Slc6a1P31648 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.49■□□□□ 0.71
Slc6a1P31648 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc6a1P31648 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Slc6a1P31648 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a1P31648 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a1P31648 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a1P31648 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a1P31648 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc6a1P31648 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a1P31648 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a1P31648 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a1P31648 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.46■□□□□ 0.71
Slc6a1P31648 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Slc6a1P31648 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a1P31648 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a1P31648 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a1P31648 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a1P31648 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a1P31648 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc6a1P31648 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Slc6a1P31648 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Slc6a1P31648 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a1P31648 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a1P31648 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a1P31648 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Slc6a1P31648 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a1P31648 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a1P31648 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Slc6a1P31648 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.44■□□□□ 0.7
Slc6a1P31648 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a1P31648 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a1P31648 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a1P31648 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Slc6a1P31648 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a1P31648 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a1P31648 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a1P31648 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Slc6a1P31648 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a1P31648 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a1P31648 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a1P31648 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Slc6a1P31648 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a1P31648 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Slc6a1P31648 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Slc6a1P31648 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.41■□□□□ 0.7
Slc6a1P31648 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a1P31648 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a1P31648 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.41■□□□□ 0.7
Slc6a1P31648 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.4■□□□□ 0.7
Slc6a1P31648 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a1P31648 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a1P31648 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a1P31648 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.39■□□□□ 0.69
Slc6a1P31648 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a1P31648 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.39■□□□□ 0.69
Slc6a1P31648 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a1P31648 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a1P31648 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a1P31648 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a1P31648 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a1P31648 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a1P31648 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Slc6a1P31648 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Slc6a1P31648 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a1P31648 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a1P31648 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.37■□□□□ 0.69
Slc6a1P31648 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a1P31648 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a1P31648 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a1P31648 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a1P31648 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Slc6a1P31648 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a1P31648 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a1P31648 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Slc6a1P31648 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a1P31648 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a1P31648 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a1P31648 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a1P31648 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a1P31648 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a1P31648 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms