Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtcraP0C6B2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtcraP0C6B2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PtcraP0C6B2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtcraP0C6B2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PtcraP0C6B2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PtcraP0C6B2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.77■□□□□ 0.76
PtcraP0C6B2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PtcraP0C6B2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PtcraP0C6B2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PtcraP0C6B2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PtcraP0C6B2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PtcraP0C6B2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PtcraP0C6B2 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.73■□□□□ 0.75
PtcraP0C6B2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PtcraP0C6B2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PtcraP0C6B2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PtcraP0C6B2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PtcraP0C6B2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.72■□□□□ 0.75
PtcraP0C6B2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PtcraP0C6B2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.72■□□□□ 0.75
PtcraP0C6B2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PtcraP0C6B2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PtcraP0C6B2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PtcraP0C6B2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.71■□□□□ 0.75
PtcraP0C6B2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PtcraP0C6B2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.7■□□□□ 0.74
PtcraP0C6B2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PtcraP0C6B2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.7■□□□□ 0.74
PtcraP0C6B2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PtcraP0C6B2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
PtcraP0C6B2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PtcraP0C6B2 Terc-201ENSMUST00000082862 423 ntBASIC19.68■□□□□ 0.74
PtcraP0C6B2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PtcraP0C6B2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PtcraP0C6B2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.68■□□□□ 0.74
PtcraP0C6B2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PtcraP0C6B2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PtcraP0C6B2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PtcraP0C6B2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PtcraP0C6B2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PtcraP0C6B2 Gm6311-201ENSMUST00000073790 878 ntBASIC19.67■□□□□ 0.74
PtcraP0C6B2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PtcraP0C6B2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PtcraP0C6B2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PtcraP0C6B2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PtcraP0C6B2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PtcraP0C6B2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PtcraP0C6B2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PtcraP0C6B2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PtcraP0C6B2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PtcraP0C6B2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.65■□□□□ 0.74
PtcraP0C6B2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PtcraP0C6B2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PtcraP0C6B2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PtcraP0C6B2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PtcraP0C6B2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PtcraP0C6B2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PtcraP0C6B2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
PtcraP0C6B2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PtcraP0C6B2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.63■□□□□ 0.73
PtcraP0C6B2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.63■□□□□ 0.73
PtcraP0C6B2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.63■□□□□ 0.73
PtcraP0C6B2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.62■□□□□ 0.73
PtcraP0C6B2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PtcraP0C6B2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.62■□□□□ 0.73
PtcraP0C6B2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.62■□□□□ 0.73
PtcraP0C6B2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.62■□□□□ 0.73
PtcraP0C6B2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PtcraP0C6B2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PtcraP0C6B2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PtcraP0C6B2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PtcraP0C6B2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.61■□□□□ 0.73
PtcraP0C6B2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PtcraP0C6B2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PtcraP0C6B2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PtcraP0C6B2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PtcraP0C6B2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PtcraP0C6B2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PtcraP0C6B2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PtcraP0C6B2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PtcraP0C6B2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PtcraP0C6B2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PtcraP0C6B2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PtcraP0C6B2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PtcraP0C6B2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PtcraP0C6B2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.58■□□□□ 0.72
PtcraP0C6B2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PtcraP0C6B2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PtcraP0C6B2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PtcraP0C6B2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PtcraP0C6B2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PtcraP0C6B2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PtcraP0C6B2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.57■□□□□ 0.72
PtcraP0C6B2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PtcraP0C6B2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PtcraP0C6B2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PtcraP0C6B2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PtcraP0C6B2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PtcraP0C6B2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms