Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Syn1O88935 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Syn1O88935 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Syn1O88935 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Syn1O88935 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.86■■□□□ 1.41
Syn1O88935 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.86■■□□□ 1.41
Syn1O88935 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Syn1O88935 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Syn1O88935 Terc-201ENSMUST00000082862 423 ntBASIC23.85■■□□□ 1.41
Syn1O88935 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.84■■□□□ 1.41
Syn1O88935 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Syn1O88935 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Syn1O88935 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Syn1O88935 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Syn1O88935 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Syn1O88935 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.83■■□□□ 1.41
Syn1O88935 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Syn1O88935 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Syn1O88935 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Syn1O88935 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Syn1O88935 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Syn1O88935 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Syn1O88935 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.82■■□□□ 1.4
Syn1O88935 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Syn1O88935 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.82■■□□□ 1.4
Syn1O88935 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Syn1O88935 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Syn1O88935 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.8■■□□□ 1.4
Syn1O88935 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Syn1O88935 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Syn1O88935 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.78■■□□□ 1.4
Syn1O88935 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Syn1O88935 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Syn1O88935 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Syn1O88935 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Syn1O88935 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Syn1O88935 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Syn1O88935 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Syn1O88935 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Syn1O88935 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.76■■□□□ 1.39
Syn1O88935 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.76■■□□□ 1.39
Syn1O88935 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Syn1O88935 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.75■■□□□ 1.39
Syn1O88935 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Syn1O88935 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Syn1O88935 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Syn1O88935 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Syn1O88935 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.74■■□□□ 1.39
Syn1O88935 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Syn1O88935 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Syn1O88935 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.73■■□□□ 1.39
Syn1O88935 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.73■■□□□ 1.39
Syn1O88935 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Syn1O88935 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.71■■□□□ 1.39
Syn1O88935 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Syn1O88935 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Syn1O88935 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.71■■□□□ 1.39
Syn1O88935 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.71■■□□□ 1.39
Syn1O88935 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.7■■□□□ 1.38
Syn1O88935 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Syn1O88935 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Syn1O88935 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Syn1O88935 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Syn1O88935 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Syn1O88935 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Syn1O88935 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Syn1O88935 Gm44428-201ENSMUST00000204474 874 ntBASIC23.69■■□□□ 1.38
Syn1O88935 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Syn1O88935 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Syn1O88935 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Syn1O88935 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Syn1O88935 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Syn1O88935 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Syn1O88935 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Syn1O88935 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Syn1O88935 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Syn1O88935 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Syn1O88935 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Syn1O88935 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Syn1O88935 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Syn1O88935 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
Syn1O88935 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Syn1O88935 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
Syn1O88935 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Syn1O88935 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Syn1O88935 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Syn1O88935 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Syn1O88935 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Syn1O88935 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Syn1O88935 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Syn1O88935 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Syn1O88935 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.63■■□□□ 1.37
Syn1O88935 Etf1-202ENSMUST00000180351 108 ntBASIC23.63■■□□□ 1.37
Syn1O88935 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Syn1O88935 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
Syn1O88935 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.63■■□□□ 1.37
Syn1O88935 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.62■■□□□ 1.37
Syn1O88935 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Syn1O88935 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Syn1O88935 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 147.8 ms