Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.47■■□□□ 1.03
Rdh5O55240 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rdh5O55240 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Rdh5O55240 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.46■■□□□ 1.03
Rdh5O55240 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rdh5O55240 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.46■■□□□ 1.03
Rdh5O55240 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rdh5O55240 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rdh5O55240 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Rdh5O55240 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rdh5O55240 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Rdh5O55240 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rdh5O55240 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rdh5O55240 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rdh5O55240 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Rdh5O55240 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Rdh5O55240 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rdh5O55240 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rdh5O55240 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rdh5O55240 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Rdh5O55240 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.43■■□□□ 1.02
Rdh5O55240 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Rdh5O55240 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.42■■□□□ 1.02
Rdh5O55240 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rdh5O55240 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rdh5O55240 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rdh5O55240 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rdh5O55240 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rdh5O55240 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.41■■□□□ 1.02
Rdh5O55240 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Rdh5O55240 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rdh5O55240 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rdh5O55240 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rdh5O55240 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rdh5O55240 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.4■■□□□ 1.02
Rdh5O55240 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rdh5O55240 Mir3960-201ENSMUST00000198213 73 ntBASIC21.39■■□□□ 1.01
Rdh5O55240 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rdh5O55240 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rdh5O55240 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rdh5O55240 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rdh5O55240 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rdh5O55240 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rdh5O55240 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.38■■□□□ 1.01
Rdh5O55240 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.38■■□□□ 1.01
Rdh5O55240 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rdh5O55240 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rdh5O55240 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rdh5O55240 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rdh5O55240 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rdh5O55240 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rdh5O55240 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.37■■□□□ 1.01
Rdh5O55240 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rdh5O55240 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.37■■□□□ 1.01
Rdh5O55240 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rdh5O55240 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rdh5O55240 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rdh5O55240 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rdh5O55240 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Rdh5O55240 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rdh5O55240 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rdh5O55240 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rdh5O55240 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rdh5O55240 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rdh5O55240 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rdh5O55240 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rdh5O55240 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rdh5O55240 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rdh5O55240 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.33■■□□□ 1.01
Rdh5O55240 Gm45364-201ENSMUST00000210883 159 ntBASIC21.33■■□□□ 1.01
Rdh5O55240 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.33■■□□□ 1.01
Rdh5O55240 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Rdh5O55240 Gm9812-201ENSMUST00000061934 968 ntBASIC21.32■■□□□ 1
Rdh5O55240 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Rdh5O55240 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rdh5O55240 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rdh5O55240 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rdh5O55240 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rdh5O55240 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.3■■□□□ 1
Rdh5O55240 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rdh5O55240 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.3■■□□□ 1
Rdh5O55240 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rdh5O55240 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.3■■□□□ 1
Rdh5O55240 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
Rdh5O55240 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Rdh5O55240 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Rdh5O55240 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rdh5O55240 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.29■■□□□ 1
Rdh5O55240 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rdh5O55240 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rdh5O55240 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.29■■□□□ 1
Rdh5O55240 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Rdh5O55240 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rdh5O55240 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Rdh5O55240 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rdh5O55240 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rdh5O55240 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.28■■□□□ 1
Rdh5O55240 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.27■■□□□ 1
Rdh5O55240 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
Rdh5O55240 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms