Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcdh1F7BJK1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh1F7BJK1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh1F7BJK1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh1F7BJK1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh1F7BJK1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh1F7BJK1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pcdh1F7BJK1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh1F7BJK1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh1F7BJK1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh1F7BJK1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh1F7BJK1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdh1F7BJK1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh1F7BJK1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh1F7BJK1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh1F7BJK1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh1F7BJK1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh1F7BJK1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdh1F7BJK1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh1F7BJK1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh1F7BJK1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh1F7BJK1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh1F7BJK1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdh1F7BJK1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdh1F7BJK1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh1F7BJK1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh1F7BJK1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh1F7BJK1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh1F7BJK1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh1F7BJK1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pcdh1F7BJK1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh1F7BJK1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh1F7BJK1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.41■□□□□ 0.86
Pcdh1F7BJK1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh1F7BJK1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh1F7BJK1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh1F7BJK1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh1F7BJK1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.41■□□□□ 0.86
Pcdh1F7BJK1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh1F7BJK1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh1F7BJK1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh1F7BJK1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh1F7BJK1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh1F7BJK1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh1F7BJK1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Pcdh1F7BJK1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh1F7BJK1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh1F7BJK1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Pcdh1F7BJK1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pcdh1F7BJK1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh1F7BJK1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh1F7BJK1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh1F7BJK1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Pcdh1F7BJK1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdh1F7BJK1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh1F7BJK1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
Pcdh1F7BJK1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh1F7BJK1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh1F7BJK1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh1F7BJK1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh1F7BJK1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdh1F7BJK1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pcdh1F7BJK1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pcdh1F7BJK1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh1F7BJK1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh1F7BJK1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdh1F7BJK1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh1F7BJK1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdh1F7BJK1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh1F7BJK1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh1F7BJK1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh1F7BJK1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh1F7BJK1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh1F7BJK1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Pcdh1F7BJK1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh1F7BJK1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh1F7BJK1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh1F7BJK1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh1F7BJK1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh1F7BJK1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh1F7BJK1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh1F7BJK1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh1F7BJK1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh1F7BJK1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh1F7BJK1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh1F7BJK1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh1F7BJK1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh1F7BJK1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh1F7BJK1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdh1F7BJK1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Pcdh1F7BJK1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdh1F7BJK1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pcdh1F7BJK1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh1F7BJK1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh1F7BJK1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh1F7BJK1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdh1F7BJK1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh1F7BJK1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh1F7BJK1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdh1F7BJK1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms