Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc71lE9Q4T4 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.8■□□□□ 0.44
Ccdc71lE9Q4T4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc71lE9Q4T4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc71lE9Q4T4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc71lE9Q4T4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc71lE9Q4T4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.79■□□□□ 0.44
Ccdc71lE9Q4T4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc71lE9Q4T4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc71lE9Q4T4 Particl-201ENSMUST00000205370 1560 ntBASIC17.79■□□□□ 0.44
Ccdc71lE9Q4T4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ccdc71lE9Q4T4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc71lE9Q4T4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc71lE9Q4T4 Gm9397-201ENSMUST00000200125 605 ntBASIC17.77■□□□□ 0.44
Ccdc71lE9Q4T4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.77■□□□□ 0.43
Ccdc71lE9Q4T4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc71lE9Q4T4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc71lE9Q4T4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc71lE9Q4T4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc71lE9Q4T4 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.76■□□□□ 0.43
Ccdc71lE9Q4T4 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.76■□□□□ 0.43
Ccdc71lE9Q4T4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.76■□□□□ 0.43
Ccdc71lE9Q4T4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc71lE9Q4T4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc71lE9Q4T4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc71lE9Q4T4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc71lE9Q4T4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc71lE9Q4T4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ccdc71lE9Q4T4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc71lE9Q4T4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc71lE9Q4T4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc71lE9Q4T4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc71lE9Q4T4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ccdc71lE9Q4T4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc71lE9Q4T4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Ccdc71lE9Q4T4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc71lE9Q4T4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc71lE9Q4T4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc71lE9Q4T4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc71lE9Q4T4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc71lE9Q4T4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc71lE9Q4T4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccdc71lE9Q4T4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Ccdc71lE9Q4T4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ccdc71lE9Q4T4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc71lE9Q4T4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc71lE9Q4T4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc71lE9Q4T4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc71lE9Q4T4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc71lE9Q4T4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc71lE9Q4T4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Ccdc71lE9Q4T4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71lE9Q4T4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71lE9Q4T4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Ccdc71lE9Q4T4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71lE9Q4T4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc71lE9Q4T4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71lE9Q4T4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71lE9Q4T4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71lE9Q4T4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc71lE9Q4T4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71lE9Q4T4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71lE9Q4T4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc71lE9Q4T4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71lE9Q4T4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71lE9Q4T4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc71lE9Q4T4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71lE9Q4T4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71lE9Q4T4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71lE9Q4T4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc71lE9Q4T4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc71lE9Q4T4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc71lE9Q4T4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71lE9Q4T4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71lE9Q4T4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71lE9Q4T4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71lE9Q4T4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc71lE9Q4T4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc71lE9Q4T4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.68■□□□□ 0.42
Ccdc71lE9Q4T4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ccdc71lE9Q4T4 Gm30023-201ENSMUST00000197970 889 ntBASIC17.67■□□□□ 0.42
Ccdc71lE9Q4T4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc71lE9Q4T4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc71lE9Q4T4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc71lE9Q4T4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc71lE9Q4T4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc71lE9Q4T4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc71lE9Q4T4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc71lE9Q4T4 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.66■□□□□ 0.42
Ccdc71lE9Q4T4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc71lE9Q4T4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc71lE9Q4T4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc71lE9Q4T4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc71lE9Q4T4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc71lE9Q4T4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.65■□□□□ 0.42
Ccdc71lE9Q4T4 Gm45855-201ENSMUST00000212546 880 ntBASIC17.65■□□□□ 0.42
Ccdc71lE9Q4T4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.65■□□□□ 0.42
Ccdc71lE9Q4T4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Ccdc71lE9Q4T4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Ccdc71lE9Q4T4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms