Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IsxA1A546 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
IsxA1A546 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IsxA1A546 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IsxA1A546 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.15■□□□□ 0.98
IsxA1A546 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
IsxA1A546 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
IsxA1A546 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
IsxA1A546 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.14■□□□□ 0.97
IsxA1A546 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.14■□□□□ 0.97
IsxA1A546 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
IsxA1A546 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
IsxA1A546 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.14■□□□□ 0.97
IsxA1A546 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
IsxA1A546 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
IsxA1A546 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
IsxA1A546 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
IsxA1A546 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IsxA1A546 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
IsxA1A546 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IsxA1A546 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
IsxA1A546 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.11■□□□□ 0.97
IsxA1A546 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IsxA1A546 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IsxA1A546 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.1■□□□□ 0.97
IsxA1A546 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
IsxA1A546 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
IsxA1A546 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
IsxA1A546 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IsxA1A546 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
IsxA1A546 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
IsxA1A546 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IsxA1A546 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
IsxA1A546 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IsxA1A546 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IsxA1A546 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.08■□□□□ 0.97
IsxA1A546 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IsxA1A546 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
IsxA1A546 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
IsxA1A546 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IsxA1A546 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IsxA1A546 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.07■□□□□ 0.96
IsxA1A546 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IsxA1A546 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IsxA1A546 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IsxA1A546 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IsxA1A546 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.07■□□□□ 0.96
IsxA1A546 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IsxA1A546 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IsxA1A546 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IsxA1A546 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IsxA1A546 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
IsxA1A546 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IsxA1A546 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
IsxA1A546 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.05■□□□□ 0.96
IsxA1A546 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.05■□□□□ 0.96
IsxA1A546 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.05■□□□□ 0.96
IsxA1A546 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
IsxA1A546 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IsxA1A546 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IsxA1A546 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
IsxA1A546 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IsxA1A546 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.04■□□□□ 0.96
IsxA1A546 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IsxA1A546 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IsxA1A546 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
IsxA1A546 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IsxA1A546 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
IsxA1A546 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.03■□□□□ 0.96
IsxA1A546 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IsxA1A546 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IsxA1A546 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
IsxA1A546 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
IsxA1A546 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IsxA1A546 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
IsxA1A546 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
IsxA1A546 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IsxA1A546 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
IsxA1A546 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
IsxA1A546 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IsxA1A546 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
IsxA1A546 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
IsxA1A546 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
IsxA1A546 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IsxA1A546 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IsxA1A546 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IsxA1A546 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IsxA1A546 Particl-201ENSMUST00000205370 1560 ntBASIC20.98■□□□□ 0.95
IsxA1A546 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
IsxA1A546 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IsxA1A546 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IsxA1A546 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IsxA1A546 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IsxA1A546 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IsxA1A546 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
IsxA1A546 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
IsxA1A546 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IsxA1A546 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IsxA1A546 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IsxA1A546 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms