Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC14.93□□□□□ -0.02
Igkv1-88A0A140T8N1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Igkv1-88A0A140T8N1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Igkv1-88A0A140T8N1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Igkv1-88A0A140T8N1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv1-88A0A140T8N1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv1-88A0A140T8N1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC14.92□□□□□ -0.02
Igkv1-88A0A140T8N1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv1-88A0A140T8N1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv1-88A0A140T8N1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv1-88A0A140T8N1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv1-88A0A140T8N1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Igkv1-88A0A140T8N1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Igkv1-88A0A140T8N1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Igkv1-88A0A140T8N1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Igkv1-88A0A140T8N1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Igkv1-88A0A140T8N1 Gm30023-201ENSMUST00000197970 889 ntBASIC14.91□□□□□ -0.02
Igkv1-88A0A140T8N1 Tdp2-203ENSMUST00000223804 1136 ntBASIC14.91□□□□□ -0.02
Igkv1-88A0A140T8N1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Igkv1-88A0A140T8N1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Igkv1-88A0A140T8N1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Igkv1-88A0A140T8N1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Igkv1-88A0A140T8N1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Igkv1-88A0A140T8N1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Igkv1-88A0A140T8N1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Igkv1-88A0A140T8N1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Igkv1-88A0A140T8N1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.89□□□□□ -0.03
Igkv1-88A0A140T8N1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Igkv1-88A0A140T8N1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Igkv1-88A0A140T8N1 Gm45855-201ENSMUST00000212546 880 ntBASIC14.89□□□□□ -0.03
Igkv1-88A0A140T8N1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Igkv1-88A0A140T8N1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Igkv1-88A0A140T8N1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Igkv1-88A0A140T8N1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Igkv1-88A0A140T8N1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Igkv1-88A0A140T8N1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Igkv1-88A0A140T8N1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv1-88A0A140T8N1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Igkv1-88A0A140T8N1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv1-88A0A140T8N1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Igkv1-88A0A140T8N1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv1-88A0A140T8N1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Igkv1-88A0A140T8N1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC14.87□□□□□ -0.03
Igkv1-88A0A140T8N1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv1-88A0A140T8N1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv1-88A0A140T8N1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv1-88A0A140T8N1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv1-88A0A140T8N1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC14.86□□□□□ -0.03
Igkv1-88A0A140T8N1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv1-88A0A140T8N1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Igkv1-88A0A140T8N1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igkv1-88A0A140T8N1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igkv1-88A0A140T8N1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC14.85□□□□□ -0.03
Igkv1-88A0A140T8N1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igkv1-88A0A140T8N1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Igkv1-88A0A140T8N1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Igkv1-88A0A140T8N1 Particl-201ENSMUST00000205370 1560 ntBASIC14.85□□□□□ -0.03
Igkv1-88A0A140T8N1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Igkv1-88A0A140T8N1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igkv1-88A0A140T8N1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Igkv1-88A0A140T8N1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Igkv1-88A0A140T8N1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Igkv1-88A0A140T8N1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv1-88A0A140T8N1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC14.83□□□□□ -0.04
Igkv1-88A0A140T8N1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC14.83□□□□□ -0.04
Igkv1-88A0A140T8N1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv1-88A0A140T8N1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv1-88A0A140T8N1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Igkv1-88A0A140T8N1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Igkv1-88A0A140T8N1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv1-88A0A140T8N1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv1-88A0A140T8N1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv1-88A0A140T8N1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv1-88A0A140T8N1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Igkv1-88A0A140T8N1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv1-88A0A140T8N1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv1-88A0A140T8N1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv1-88A0A140T8N1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv1-88A0A140T8N1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv1-88A0A140T8N1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv1-88A0A140T8N1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv1-88A0A140T8N1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Igkv1-88A0A140T8N1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
Igkv1-88A0A140T8N1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv1-88A0A140T8N1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv1-88A0A140T8N1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv1-88A0A140T8N1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv1-88A0A140T8N1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv1-88A0A140T8N1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv1-88A0A140T8N1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Igkv1-88A0A140T8N1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv1-88A0A140T8N1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv1-88A0A140T8N1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Igkv1-88A0A140T8N1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igkv1-88A0A140T8N1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igkv1-88A0A140T8N1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igkv1-88A0A140T8N1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Igkv1-88A0A140T8N1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Igkv1-88A0A140T8N1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Igkv1-88A0A140T8N1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms