Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-2A0A0G2JF93 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-2A0A0G2JF93 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-2A0A0G2JF93 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav13n-2A0A0G2JF93 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-2A0A0G2JF93 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13n-2A0A0G2JF93 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav13n-2A0A0G2JF93 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13n-2A0A0G2JF93 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trav13n-2A0A0G2JF93 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13n-2A0A0G2JF93 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13n-2A0A0G2JF93 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav13n-2A0A0G2JF93 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-2A0A0G2JF93 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-2A0A0G2JF93 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-2A0A0G2JF93 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-2A0A0G2JF93 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-2A0A0G2JF93 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-2A0A0G2JF93 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav13n-2A0A0G2JF93 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-2A0A0G2JF93 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-2A0A0G2JF93 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav13n-2A0A0G2JF93 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-2A0A0G2JF93 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-2A0A0G2JF93 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-2A0A0G2JF93 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-2A0A0G2JF93 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-2A0A0G2JF93 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-2A0A0G2JF93 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-2A0A0G2JF93 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav13n-2A0A0G2JF93 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav13n-2A0A0G2JF93 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Trav13n-2A0A0G2JF93 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav13n-2A0A0G2JF93 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav13n-2A0A0G2JF93 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-2A0A0G2JF93 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav13n-2A0A0G2JF93 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav13n-2A0A0G2JF93 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav13n-2A0A0G2JF93 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-2A0A0G2JF93 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-2A0A0G2JF93 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-2A0A0G2JF93 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav13n-2A0A0G2JF93 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-2A0A0G2JF93 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-2A0A0G2JF93 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-2A0A0G2JF93 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-2A0A0G2JF93 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-2A0A0G2JF93 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav13n-2A0A0G2JF93 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-2A0A0G2JF93 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-2A0A0G2JF93 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav13n-2A0A0G2JF93 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-2A0A0G2JF93 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.95□□□□□ -0.02
Trav13n-2A0A0G2JF93 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav13n-2A0A0G2JF93 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-2A0A0G2JF93 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav13n-2A0A0G2JF93 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav13n-2A0A0G2JF93 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-2A0A0G2JF93 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-2A0A0G2JF93 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-2A0A0G2JF93 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-2A0A0G2JF93 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-2A0A0G2JF93 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-2A0A0G2JF93 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Trav13n-2A0A0G2JF93 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-2A0A0G2JF93 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-2A0A0G2JF93 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-2A0A0G2JF93 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-2A0A0G2JF93 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-2A0A0G2JF93 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav13n-2A0A0G2JF93 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-2A0A0G2JF93 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-2A0A0G2JF93 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-2A0A0G2JF93 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-2A0A0G2JF93 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Trav13n-2A0A0G2JF93 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-2A0A0G2JF93 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-2A0A0G2JF93 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav13n-2A0A0G2JF93 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav13n-2A0A0G2JF93 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-2A0A0G2JF93 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-2A0A0G2JF93 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-2A0A0G2JF93 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-2A0A0G2JF93 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-2A0A0G2JF93 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-2A0A0G2JF93 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav13n-2A0A0G2JF93 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-2A0A0G2JF93 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-2A0A0G2JF93 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav13n-2A0A0G2JF93 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-2A0A0G2JF93 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-2A0A0G2JF93 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-2A0A0G2JF93 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav13n-2A0A0G2JF93 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-2A0A0G2JF93 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-2A0A0G2JF93 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13n-2A0A0G2JF93 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav13n-2A0A0G2JF93 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13n-2A0A0G2JF93 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav13n-2A0A0G2JF93 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms