Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv20A0A0B4J1H5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv20A0A0B4J1H5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv20A0A0B4J1H5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv20A0A0B4J1H5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv20A0A0B4J1H5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.45■□□□□ 0.86
Trbv20A0A0B4J1H5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv20A0A0B4J1H5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv20A0A0B4J1H5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Trbv20A0A0B4J1H5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv20A0A0B4J1H5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv20A0A0B4J1H5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv20A0A0B4J1H5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv20A0A0B4J1H5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv20A0A0B4J1H5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv20A0A0B4J1H5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv20A0A0B4J1H5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trbv20A0A0B4J1H5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv20A0A0B4J1H5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv20A0A0B4J1H5 Gm30023-201ENSMUST00000197970 889 ntBASIC20.4■□□□□ 0.86
Trbv20A0A0B4J1H5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trbv20A0A0B4J1H5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trbv20A0A0B4J1H5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trbv20A0A0B4J1H5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Trbv20A0A0B4J1H5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trbv20A0A0B4J1H5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trbv20A0A0B4J1H5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trbv20A0A0B4J1H5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trbv20A0A0B4J1H5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trbv20A0A0B4J1H5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Trbv20A0A0B4J1H5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trbv20A0A0B4J1H5 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.38■□□□□ 0.85
Trbv20A0A0B4J1H5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trbv20A0A0B4J1H5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv20A0A0B4J1H5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv20A0A0B4J1H5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.37■□□□□ 0.85
Trbv20A0A0B4J1H5 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.37■□□□□ 0.85
Trbv20A0A0B4J1H5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv20A0A0B4J1H5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv20A0A0B4J1H5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv20A0A0B4J1H5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv20A0A0B4J1H5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv20A0A0B4J1H5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv20A0A0B4J1H5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv20A0A0B4J1H5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Trbv20A0A0B4J1H5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv20A0A0B4J1H5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv20A0A0B4J1H5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv20A0A0B4J1H5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv20A0A0B4J1H5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv20A0A0B4J1H5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.35■□□□□ 0.85
Trbv20A0A0B4J1H5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv20A0A0B4J1H5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv20A0A0B4J1H5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.35■□□□□ 0.85
Trbv20A0A0B4J1H5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv20A0A0B4J1H5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv20A0A0B4J1H5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv20A0A0B4J1H5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv20A0A0B4J1H5 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.34■□□□□ 0.85
Trbv20A0A0B4J1H5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv20A0A0B4J1H5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv20A0A0B4J1H5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv20A0A0B4J1H5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trbv20A0A0B4J1H5 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.33■□□□□ 0.85
Trbv20A0A0B4J1H5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trbv20A0A0B4J1H5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trbv20A0A0B4J1H5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Trbv20A0A0B4J1H5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trbv20A0A0B4J1H5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trbv20A0A0B4J1H5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.33■□□□□ 0.84
Trbv20A0A0B4J1H5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trbv20A0A0B4J1H5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trbv20A0A0B4J1H5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trbv20A0A0B4J1H5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Trbv20A0A0B4J1H5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trbv20A0A0B4J1H5 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trbv20A0A0B4J1H5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trbv20A0A0B4J1H5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv20A0A0B4J1H5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv20A0A0B4J1H5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv20A0A0B4J1H5 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.31■□□□□ 0.84
Trbv20A0A0B4J1H5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trbv20A0A0B4J1H5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv20A0A0B4J1H5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.31■□□□□ 0.84
Trbv20A0A0B4J1H5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv20A0A0B4J1H5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trbv20A0A0B4J1H5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv20A0A0B4J1H5 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.3■□□□□ 0.84
Trbv20A0A0B4J1H5 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv20A0A0B4J1H5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv20A0A0B4J1H5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.29■□□□□ 0.84
Trbv20A0A0B4J1H5 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.29■□□□□ 0.84
Trbv20A0A0B4J1H5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trbv20A0A0B4J1H5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv20A0A0B4J1H5 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.27■□□□□ 0.84
Trbv20A0A0B4J1H5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trbv20A0A0B4J1H5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv20A0A0B4J1H5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv20A0A0B4J1H5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trbv20A0A0B4J1H5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms