Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.8■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.8■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.8■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.78■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv13-3A0A0B4J1H2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.78■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Gm8109-201ENSMUST00000194076 746 ntBASIC17.78■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv13-3A0A0B4J1H2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.76■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.75■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.72■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv13-3A0A0B4J1H2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv13-3A0A0B4J1H2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.71■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.7■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv13-3A0A0B4J1H2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv13-3A0A0B4J1H2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv13-3A0A0B4J1H2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv13-3A0A0B4J1H2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.67■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv13-3A0A0B4J1H2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms