Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav6n-6A0A075B6B2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6n-6A0A075B6B2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6n-6A0A075B6B2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav6n-6A0A075B6B2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-6A0A075B6B2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-6A0A075B6B2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-6A0A075B6B2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-6A0A075B6B2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-6A0A075B6B2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-6A0A075B6B2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-6A0A075B6B2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav6n-6A0A075B6B2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-6A0A075B6B2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-6A0A075B6B2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-6A0A075B6B2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Trav6n-6A0A075B6B2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-6A0A075B6B2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-6A0A075B6B2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-6A0A075B6B2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Trav6n-6A0A075B6B2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-6A0A075B6B2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-6A0A075B6B2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-6A0A075B6B2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-6A0A075B6B2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav6n-6A0A075B6B2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-6A0A075B6B2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav6n-6A0A075B6B2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-6A0A075B6B2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav6n-6A0A075B6B2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-6A0A075B6B2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-6A0A075B6B2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-6A0A075B6B2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trav6n-6A0A075B6B2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav6n-6A0A075B6B2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6n-6A0A075B6B2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trav6n-6A0A075B6B2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6n-6A0A075B6B2 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.77■□□□□ 0.28
Trav6n-6A0A075B6B2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6n-6A0A075B6B2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6n-6A0A075B6B2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav6n-6A0A075B6B2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6n-6A0A075B6B2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6n-6A0A075B6B2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6n-6A0A075B6B2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav6n-6A0A075B6B2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6n-6A0A075B6B2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Trav6n-6A0A075B6B2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav6n-6A0A075B6B2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6n-6A0A075B6B2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6n-6A0A075B6B2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6n-6A0A075B6B2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6n-6A0A075B6B2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Trav6n-6A0A075B6B2 Notumos-201ENSMUST00000151998 2659 ntBASIC16.75■□□□□ 0.27
Trav6n-6A0A075B6B2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6n-6A0A075B6B2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6n-6A0A075B6B2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6n-6A0A075B6B2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav6n-6A0A075B6B2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6n-6A0A075B6B2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6n-6A0A075B6B2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav6n-6A0A075B6B2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6n-6A0A075B6B2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6n-6A0A075B6B2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6n-6A0A075B6B2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6n-6A0A075B6B2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6n-6A0A075B6B2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6n-6A0A075B6B2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6n-6A0A075B6B2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6n-6A0A075B6B2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav6n-6A0A075B6B2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav6n-6A0A075B6B2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6n-6A0A075B6B2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6n-6A0A075B6B2 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.71■□□□□ 0.27
Trav6n-6A0A075B6B2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trav6n-6A0A075B6B2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6n-6A0A075B6B2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6n-6A0A075B6B2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Trav6n-6A0A075B6B2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6n-6A0A075B6B2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6n-6A0A075B6B2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6n-6A0A075B6B2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6n-6A0A075B6B2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav6n-6A0A075B6B2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6n-6A0A075B6B2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6n-6A0A075B6B2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6n-6A0A075B6B2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Trav6n-6A0A075B6B2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav6n-6A0A075B6B2 Nkain2-201ENSMUST00000092602 558 ntBASIC16.68■□□□□ 0.26
Trav6n-6A0A075B6B2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6n-6A0A075B6B2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6n-6A0A075B6B2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6n-6A0A075B6B2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6n-6A0A075B6B2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6n-6A0A075B6B2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6n-6A0A075B6B2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6n-6A0A075B6B2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav6n-6A0A075B6B2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6n-6A0A075B6B2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Trav6n-6A0A075B6B2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms